Release of cell-free enzymes by marine pelagic fungal strains

IF 2.1 Q3 MYCOLOGY
Katherine Salazar-Alekseyeva, Gerhard J. Herndl, Federico Baltar
{"title":"Release of cell-free enzymes by marine pelagic fungal strains","authors":"Katherine Salazar-Alekseyeva, Gerhard J. Herndl, Federico Baltar","doi":"10.3389/ffunb.2023.1209265","DOIUrl":null,"url":null,"abstract":"Fungi are ubiquitous organisms that secrete different enzymes to cleave large molecules into smaller ones so that can then be assimilated. Recent studies suggest that fungi are also present in the oceanic water column harboring the enzymatic repertoire necessary to cleave carbohydrates and proteins. In marine prokaryotes, the cell-free fraction is an important contributor to the oceanic extracellular enzymatic activities (EEAs), but the release of cell-free enzymes by marine fungi remains unknown. Here, to study the cell-free enzymatic activities of marine fungi and the potential influence of salinity on them, five strains of marine fungi that belong to the most abundant pelagic phyla (Ascomycota and Basidiomycota), were grown under non-saline and saline conditions (0 g/L and 35 g/L, respectively). The biomass was separated from the medium by filtration (0.2 μm), and the filtrate was used to perform fluorogenic enzymatic assays with substrate analogues of carbohydrates, lipids, organic phosphorus, sulfur moieties, and proteins. Kinetic parameters such as maximum velocity (V max ) and half-saturation constant (K m ) were obtained. The species studied were able to release cell-free enzymes, and this represented up to 85.1% of the respective total EEA. However, this differed between species and enzymes, with some of the highest contributions being found in those with low total EEA, with some exceptions. This suggests that some of these contributions to the enzymatic pool might be minimal compared to those with higher total EEA. Generally, in the saline medium, the release of cell-free enzymes degrading carbohydrates was reduced compared to the non-saline medium, but those degrading lipids and sulfur moieties were increased. For the remaining substrates, there was not a clear influence of the salinity. Taken together, our results suggest that marine fungi are potential contributors to the oceanic dissolved (i.e., cell-free) enzymatic pool. Our results also suggest that, under salinity changes, a potential effect of global warming, the hydrolysis of organic matter by marine fungal cell-free enzymes might be affected and hence, their potential contribution to the oceanic biogeochemical cycles.","PeriodicalId":73084,"journal":{"name":"Frontiers in fungal biology","volume":"18 17","pages":"0"},"PeriodicalIF":2.1000,"publicationDate":"2023-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in fungal biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3389/ffunb.2023.1209265","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MYCOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Fungi are ubiquitous organisms that secrete different enzymes to cleave large molecules into smaller ones so that can then be assimilated. Recent studies suggest that fungi are also present in the oceanic water column harboring the enzymatic repertoire necessary to cleave carbohydrates and proteins. In marine prokaryotes, the cell-free fraction is an important contributor to the oceanic extracellular enzymatic activities (EEAs), but the release of cell-free enzymes by marine fungi remains unknown. Here, to study the cell-free enzymatic activities of marine fungi and the potential influence of salinity on them, five strains of marine fungi that belong to the most abundant pelagic phyla (Ascomycota and Basidiomycota), were grown under non-saline and saline conditions (0 g/L and 35 g/L, respectively). The biomass was separated from the medium by filtration (0.2 μm), and the filtrate was used to perform fluorogenic enzymatic assays with substrate analogues of carbohydrates, lipids, organic phosphorus, sulfur moieties, and proteins. Kinetic parameters such as maximum velocity (V max ) and half-saturation constant (K m ) were obtained. The species studied were able to release cell-free enzymes, and this represented up to 85.1% of the respective total EEA. However, this differed between species and enzymes, with some of the highest contributions being found in those with low total EEA, with some exceptions. This suggests that some of these contributions to the enzymatic pool might be minimal compared to those with higher total EEA. Generally, in the saline medium, the release of cell-free enzymes degrading carbohydrates was reduced compared to the non-saline medium, but those degrading lipids and sulfur moieties were increased. For the remaining substrates, there was not a clear influence of the salinity. Taken together, our results suggest that marine fungi are potential contributors to the oceanic dissolved (i.e., cell-free) enzymatic pool. Our results also suggest that, under salinity changes, a potential effect of global warming, the hydrolysis of organic matter by marine fungal cell-free enzymes might be affected and hence, their potential contribution to the oceanic biogeochemical cycles.
海洋远洋真菌菌株释放无细胞酶的研究
真菌是一种无处不在的生物,它们分泌不同的酶,将大分子分解成小分子,然后被吸收。最近的研究表明,真菌也存在于海洋水柱中,含有切割碳水化合物和蛋白质所必需的酶库。在海洋原核生物中,无细胞部分是海洋胞外酶活性(EEAs)的重要贡献者,但海洋真菌释放的无细胞酶尚不清楚。为了研究海洋真菌的无细胞酶活性以及盐度对其的潜在影响,我们在无盐和含盐条件下(分别为0 g/L和35 g/L)培养了5株海洋真菌,它们属于最丰富的远洋门(子囊菌门和担子菌门)。通过过滤(0.2 μm)将生物质从培养基中分离出来,滤液用于碳水化合物、脂类、有机磷、硫部分和蛋白质的底物类似物进行荧光酶分析。得到了最大流速(V max)和半饱和常数(K m)等动力学参数。所研究的物种能够释放无细胞酶,这代表了各自总EEA的85.1%。然而,这在物种和酶之间有所不同,在总EEA较低的物种中发现了一些最高的贡献,也有一些例外。这表明,与那些总EEA较高的人相比,这些对酶库的贡献可能是最小的。总的来说,在盐水培养基中,降解碳水化合物的无细胞酶的释放比不含盐的培养基减少,但降解脂质和硫的酶的释放增加。对于其余基质,盐度对其影响不明显。综上所述,我们的研究结果表明,海洋真菌是海洋溶解(即无细胞)酶池的潜在贡献者。我们的研究结果还表明,在盐度变化(全球变暖的潜在影响)下,海洋真菌无细胞酶对有机物的水解可能受到影响,因此,它们对海洋生物地球化学循环的潜在贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
2.70
自引率
0.00%
发文量
0
审稿时长
13 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信