Prevalence and molecular characterization of carbapenem resistant gram-negative bacilli in a tertiary care hospital in Mumbai

Srujana Prabhala, Aarthi Sundaresan, Ami Varaiya
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Abstract

Carbapenem (CR) among gram-negative bacteria is a worldwide problem. It is ranked in the highest priority category in the World Health Organization (WHO) global priority list of pathogens.It is responsible for therapeutic failure in both hospital and community-acquired infections. Identifying and monitoring the local epidemiology of the carbapenem resistant organisms, understanding specific mechanisms underlying the resistance and implementing measures to prevent their spread is the need of the hour. The aim of the study was to determine the prevalence and molecular epidemiology of Carbapenem resistant Gram negative bacilli in this hospital. : A retrospective study was carried out in the Department of Microbiology of a tertiary care Hospital in Mumbai from January to December 2022. All Gram negative bacilli from various specimens were identified and antimicrobial susceptibility was reported using the VITEK2 automated system (BioMerieux, Durham, North Carolina) and interpreted as per CLSI 2022 guidelines. The resistant genes in the isolates were detected by Xpert Carba-R assay (Cepheid, Sunnyvale, CA) on request by a consulting physician. : Out of 2,351 gram negative bacilli isolates, 624 were Carbapenem resistant (26.5%). (59.9%) was the most common CR isolate. Molecular testing was done for 190 of these 624 CR isolates. In which New Delhi Metallo beta lactamase (NDM (33.68%) was the most common resistant gene identified followed by NDM & OXA-48(32.63%). With the prevalence of Carbapenem resistant isolates in the settings, adherence to infection control practices and stringent implementation of antimicrobial stewardship is crucial to curb the rate of infection.
孟买某三级医院耐碳青霉烯革兰氏阴性杆菌的流行及分子特征
革兰氏阴性菌中的碳青霉烯(CR)是一个世界性的问题。在世界卫生组织(世卫组织)全球病原体优先清单中,它被列为最高优先类别。它是医院和社区获得性感染治疗失败的原因。当务之急是确定和监测碳青霉烯耐药生物的当地流行病学,了解耐药的具体机制,并采取措施防止其传播。本研究旨在了解该院耐碳青霉烯革兰氏阴性杆菌的流行情况及分子流行病学。2022年1月至12月在孟买一家三级医院微生物科进行了回顾性研究。使用VITEK2自动化系统(BioMerieux, Durham, North Carolina)对来自各种标本的所有革兰氏阴性杆菌进行鉴定,并报告抗菌药物敏感性,并根据CLSI 2022指南进行解释。应咨询医生的要求,用Xpert Carba-R法检测分离株中的耐药基因(造父变星,Sunnyvale, CA)。在2,351株革兰氏阴性杆菌中,624株对碳青霉烯类耐药(26.5%)。(59.9%)是最常见的CR分离物。对624株CR分离株中的190株进行了分子检测。其中,最常见的耐药基因为新德里金属内酰胺酶(NDM)(33.68%),其次为NDM;OXA-48(32.63%)。随着环境中碳青霉烯耐药分离株的流行,遵守感染控制做法和严格实施抗微生物药物管理对遏制感染率至关重要。
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