Deep Learning by Domain Transfer for Early Tumor Detection in the Urinary Bladder

Q4 Engineering
Thomas Wittenberg, Thomas Eixelberger, Stephan Kruck, Sebastian Belle, Maximilian Kriegmair, Christian Bolenz, Philip Maisch
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引用次数: 0

Abstract

Abstract Background: Bladder cancer (BCa) is the second most common genitourinary malignancy and has a mortality of 165,000 deaths p.a. The diagnosis of BCa is mostly carried out using cystoscopy - the visual examination of the urinary bladder with an endoscope. White light cystoscopy is currently considered as gold standard for the diagnosis. Nevertheless, especially flat, small or weakly textured lesions, are very difficult to detect and diagnose. Objective: With the advent of deep learning and already commercially available systems for the detection of adenomas in colonoscopy, it is investigated how such a system - for colonoscopy - performs if retrained and tested with cystoscopy images. Methods: A deep neural network with a YOLOv7-tiny architecture was pre-trained on 35,699 colonoscopy images (partially from Mannheim), yielding a precision = 0.92, sensitivity = 0.90, F1 = 0.91 on public colonoscopy data collections. Results: Testing this adenomadetection network with cystoscopy images from three sources (Ulm, Erlangen, Pforzheim), F1 scores in the range of 0.67 to 0.74 could be achieved. The network was then retrained with 12,066 cystoscopy images (from Mannheim), yielding improved F1 scores in the range of 0.78 to 0.85. Conclusion: It could be shown that a deep learning network for adenoma detection in colonoscopy is ad-hoc able to detect approximately 75% of the lesions in the urinary bladder in cystoscopy images, suggesting that these lesions have a similar appearance. After retraining the network with additional cystoscopy data, the performance for urinary lesion detection could be improved, indicating that a domain-shift with adequate additional data is feasible.
基于领域转移的深度学习用于膀胱早期肿瘤检测
背景:膀胱癌(BCa)是第二常见的泌尿生殖系统恶性肿瘤,每年死亡人数为165,000人。BCa的诊断主要是通过膀胱镜检查-在内窥镜下对膀胱进行视觉检查。白光膀胱镜检查目前被认为是诊断的金标准。然而,尤其是扁平、小或质地弱的病变,很难发现和诊断。目的:随着深度学习的出现和已经商业化的结肠镜检查腺瘤检测系统的出现,研究了这种结肠镜检查系统在经过再训练和膀胱镜检查图像测试后的表现。方法:对35,699张结肠镜图像(部分来自曼海姆)进行YOLOv7-tiny架构的深度神经网络预训练,对公共结肠镜数据集的精度= 0.92,灵敏度= 0.90,F1 = 0.91。结果:通过三个来源(Ulm, Erlangen, Pforzheim)的膀胱镜图像对该腺瘤检测网络进行测试,F1评分范围为0.67至0.74。然后用12066张膀胱镜图像(来自曼海姆)对该网络进行再训练,F1得分在0.78到0.85之间。结论:结肠镜下腺瘤检测的深度学习网络能够在膀胱镜图像中检测出大约75%的膀胱病变,这表明这些病变具有相似的外观。在使用额外的膀胱镜数据对网络进行再训练后,尿液病变检测的性能可以得到改善,这表明使用足够的额外数据进行域移位是可行的。
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来源期刊
Current Directions in Biomedical Engineering
Current Directions in Biomedical Engineering Engineering-Biomedical Engineering
CiteScore
0.90
自引率
0.00%
发文量
239
审稿时长
14 weeks
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