Ligand Based Multi-Targeted Molecular Docking Analysis o f Terpenoid Phytoconstituents as Potential Chemotherapeutic Agents Against Breast Cancer: An In Silico Approach

Senthil Kumar Raju, Shridharshini Kumar, Praveen Sekar, Naveena Sundhararajan, Yogadharshini Nagalingam
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Abstract

Breast cancer is one of the most common cancers in women all around the world and is a dominant cause of deaths occurring all around the globe. The available potent drugs for breast cancer show adverse effects and resistance and are found to be ineffective in patients. The high cost of currently available cancer therapy and certain limitations of current treatment make it necessary to search for novel, cost-effective and efficient methods of cancer treatment. Phytochemicals are directly involved in treatment or precursors to synthesize useful drugs. Therefore, in the current investigation, 500 terpenoid phytoconstituents and five proteins associated with breast cancer including EGFR, ERα, HER2, NF-κB and Topo IIa were selected from various databases. Selected compounds were screened for their molecular properties based on Lipinski's rule of five resulting in 235 compounds exclusion. Drug-likeness and PAINS alert properties were predicted using pkCSM and SwissADME web servers which led to the omission of 43 compounds. The remaining 222 compounds were screened to predict their ADMET properties and based on these results, 117 compounds were selected to predict the anti-breast cancer potential. Finally, 73 compounds, which showed anti-breast cancer activity prediction, were virtually screened and the top four best-scoring compounds were selected as lead-like molecules and docked with the five respective breast cancer targets. The results showed that the top four lead-like molecules exhibited greater binding affinity and lesser toxicity than the standard drugs namely 4–Hydroxytamoxifen, Daunorubicin, Erlotinib and Lapatinib. Keywords: ADMET, Breast cancer, Chemotherapeutic agents, In silico analysis, Molecular docking, Terpenoids
基于配体的萜类植物成分作为潜在的乳腺癌化疗药物的多靶向分子对接分析:一种计算机方法
乳腺癌是世界上最常见的女性癌症之一,也是全球范围内死亡的主要原因。现有的治疗乳腺癌的强效药物显示出不良反应和耐药性,并且发现对患者无效。目前可用的癌症治疗的高成本和现有治疗的某些局限性使得有必要寻找新的、经济有效的癌症治疗方法。植物化学物质直接参与治疗或合成有用药物的前体。因此,本研究从不同的数据库中选择了500种萜类植物成分和5种与乳腺癌相关的蛋白,包括EGFR、ERα、HER2、NF-κB和Topo IIa。根据Lipinski的五法则对所选化合物进行分子性质筛选,排除了235个化合物。使用pkCSM和SwissADME网络服务器预测药物相似性和疼痛警报特性,导致43个化合物的遗漏。对其余222个化合物进行筛选以预测其ADMET性质,并根据这些结果筛选出117个化合物用于预测其抗乳腺癌潜力。最后,对73种具有抗乳腺癌活性预测的化合物进行了虚拟筛选,并选择了得分最高的4种化合物作为类铅分子,与5种各自的乳腺癌靶点对接。结果表明,与4 -羟他莫昔芬、柔红霉素、厄洛替尼和拉帕替尼等标准药物相比,前4种类铅分子具有更大的结合亲和力和更小的毒性。关键词:ADMET,乳腺癌,化疗药物,硅分析,分子对接,萜类化合物
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