Burden of Rotavirus (RV) Infection in Children Below Five Years of Age Having Acute Diarrhoea and Pattern of Circulating Genotypes in a Community in Indore City of Madhya Pradesh
{"title":"Burden of Rotavirus (RV) Infection in Children Below Five Years of Age Having Acute Diarrhoea and Pattern of Circulating Genotypes in a Community in Indore City of Madhya Pradesh","authors":"Aakansha Gupta","doi":"10.24321/2278.2044.202349","DOIUrl":null,"url":null,"abstract":"Background: Determining the prevalence of rotavirus in a specificarea can provide valuable insights regarding its seasonality, aid thehealthcare system in effectively managing cases of acute diarrhoea,and contribute to the prevention of drug misuse.Aim: To study the burden of rotavirus infection in children below fiveyears of age having acute diarrhoea and pattern of circulating genotypesin a community in Indore city of Madhya Pradesh.Methods: Children below five years of age with acute diarrhoea provideda total of 100 stool samples, which were then tested for the presenceof rotavirus antigen using an enzyme immunoassay (EIA). After that,RT-PCR was used to genotype the EIA-positive samples’ G and P types.Demographic and clinical information were recorded on a proforma.Results: The prevalence of rotavirus infection in children below fiveyears of age having acute diarrhoea was 17%. Nine typeable rotavirusstrains out of a total of 17 were typed using RT-PCR. One strain (11.1%)was partially typed, two strains (22.2%) were not typeable, and sixstrains (66.7%) were fully genotyped for the G and P genotypes. TheG1 genotype was found in the greatest number of strains (5, 71.4%),followed by G2 and G10 in 1 strain each (14.3% each). P8 and P4 werefound in one strain each (50.0% each).Conclusion: The majority of rotavirus strains were G1 genotyped. Inorder to boost the regional specificity of multivalent RV vaccines, thisstudy emphasises the need to include new rotavirus strains. How to cite this article:Gupta A, Shah H. Burden of Rotavirus (RV)Infection in Children Below Five Years of AgeHaving Acute Diarrhoea and Pattern of CirculatingGenotypes in a Community in Indore City ofMadhya Pradesh. Chettinad Health City Med J.2023;12(3):41-44. DOI: https://doi.org/10.24321/2278.2044.202349","PeriodicalId":276735,"journal":{"name":"Chettinad Health City Medical Journal","volume":"47 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chettinad Health City Medical Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.24321/2278.2044.202349","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
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Abstract
Background: Determining the prevalence of rotavirus in a specificarea can provide valuable insights regarding its seasonality, aid thehealthcare system in effectively managing cases of acute diarrhoea,and contribute to the prevention of drug misuse.Aim: To study the burden of rotavirus infection in children below fiveyears of age having acute diarrhoea and pattern of circulating genotypesin a community in Indore city of Madhya Pradesh.Methods: Children below five years of age with acute diarrhoea provideda total of 100 stool samples, which were then tested for the presenceof rotavirus antigen using an enzyme immunoassay (EIA). After that,RT-PCR was used to genotype the EIA-positive samples’ G and P types.Demographic and clinical information were recorded on a proforma.Results: The prevalence of rotavirus infection in children below fiveyears of age having acute diarrhoea was 17%. Nine typeable rotavirusstrains out of a total of 17 were typed using RT-PCR. One strain (11.1%)was partially typed, two strains (22.2%) were not typeable, and sixstrains (66.7%) were fully genotyped for the G and P genotypes. TheG1 genotype was found in the greatest number of strains (5, 71.4%),followed by G2 and G10 in 1 strain each (14.3% each). P8 and P4 werefound in one strain each (50.0% each).Conclusion: The majority of rotavirus strains were G1 genotyped. Inorder to boost the regional specificity of multivalent RV vaccines, thisstudy emphasises the need to include new rotavirus strains. How to cite this article:Gupta A, Shah H. Burden of Rotavirus (RV)Infection in Children Below Five Years of AgeHaving Acute Diarrhoea and Pattern of CirculatingGenotypes in a Community in Indore City ofMadhya Pradesh. Chettinad Health City Med J.2023;12(3):41-44. DOI: https://doi.org/10.24321/2278.2044.202349
背景:确定轮状病毒在特定地区的流行情况可以提供有关其季节性的有价值的见解,帮助卫生保健系统有效地管理急性腹泻病例,并有助于预防药物滥用。目的:研究中央邦印多尔市某社区5岁以下急性腹泻患儿轮状病毒感染负担及流行基因型模式。方法:5岁以下急性腹泻患儿提供了总共100份粪便样本,然后使用酶免疫测定法(EIA)检测轮状病毒抗原的存在。然后用RT-PCR对eia阳性样品的G型和P型进行基因分型。人口统计和临床信息记录在表格上。结果:5岁以下急性腹泻患儿轮状病毒感染率为17%。采用RT-PCR技术对17株轮状病毒株中的9株进行了分型。1株(11.1%)部分分型,2株(22.2%)不可分型,6株(66.7%)完全分型为G和P基因型。g1基因型最多(5株,71.4%),G2和G10基因型次之,各1株(14.3%)。P8和P4各1株,各占50.0%。结论:大部分轮状病毒株为G1型。为了提高多价RV疫苗的区域特异性,本研究强调需要纳入新的轮状病毒毒株。Gupta A, Shah H.中央邦印多尔市一个社区5岁以下急性腹泻儿童轮状病毒(RV)感染负担和循环基因型模式中华卫生杂志;2009;12(3):41-44。DOI: https://doi.org/10.24321/2278.2044.202349