{"title":"Autofocusing algorithm comparison in bright field microscopy for automatic vision aided cell micromanipulation","authors":"M. Y. Yu, M. Han, C. Shee, W. T. Ang","doi":"10.1109/NANOMED.2010.5749811","DOIUrl":null,"url":null,"abstract":"Autofocusing is an essential technique in many machine vision aided microscopy application. This paper presents a comparison study of 6 autofocusing algorithms under bright field illumination: a) Normalized Variance (VAR), b) Tenengrad Gradient (TEN), c) DB06 wavelet filter (DB06), d) Fast Fourier Transform (FFT), e) Standard Deviation (STD) and f) Sum Modulus Difference (SMD). In the study, all the 6 algorithms are integrated with the exhaustive search technique and implemented using LabVIEW on a Pentium 4 desktop computer. A total of 2,204 microscope images of a micropipette tip are acquired at different microscope objective positions controlled by a high precision stepper motor under 2.8X magnification, are used to evaluate the performance of the algorithms in terms of processing speed, accuracy, consistency, sensitivity to image size and sensitivity to movement step resolution. It can be concluded that VAR and STD perform well in all performance measures.","PeriodicalId":446237,"journal":{"name":"2010 IEEE International Conference on Nano/Molecular Medicine and Engineering","volume":"29 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2010-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"9","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2010 IEEE International Conference on Nano/Molecular Medicine and Engineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/NANOMED.2010.5749811","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 9
Abstract
Autofocusing is an essential technique in many machine vision aided microscopy application. This paper presents a comparison study of 6 autofocusing algorithms under bright field illumination: a) Normalized Variance (VAR), b) Tenengrad Gradient (TEN), c) DB06 wavelet filter (DB06), d) Fast Fourier Transform (FFT), e) Standard Deviation (STD) and f) Sum Modulus Difference (SMD). In the study, all the 6 algorithms are integrated with the exhaustive search technique and implemented using LabVIEW on a Pentium 4 desktop computer. A total of 2,204 microscope images of a micropipette tip are acquired at different microscope objective positions controlled by a high precision stepper motor under 2.8X magnification, are used to evaluate the performance of the algorithms in terms of processing speed, accuracy, consistency, sensitivity to image size and sensitivity to movement step resolution. It can be concluded that VAR and STD perform well in all performance measures.
在许多机器视觉辅助显微镜应用中,自动对焦是一项必不可少的技术。本文对6种亮场照明下的自动聚焦算法进行了比较研究:a)归一化方差(VAR), b) Tenengrad梯度(TEN), c) DB06小波滤波(DB06), d)快速傅立叶变换(FFT), e)标准差(STD)和和模差(SMD)。在本研究中,所有6种算法都与穷举搜索技术相结合,并在Pentium 4台式计算机上使用LabVIEW实现。在2.8倍放大率下,在高精度步进电机控制下,在不同显微镜物镜位置获取2204张显微图像,从处理速度、精度、一致性、对图像大小的敏感性和对运动步进分辨率的敏感性等方面评价算法的性能。VAR和STD在各项绩效指标中均表现良好。