M. Tahir, A. Ahmad, Y. Usman, A. Muhammad, Temitope Ige, O. Jimoh, S. Aliyu, A. Usman, M. Imam, Z. Tanko, E. Balogun, A. Suleiman
{"title":"Laboratory diagnostic phases of detection of SARS-CoV-2 by real-time reverse transcription-polymerase chain reaction","authors":"M. Tahir, A. Ahmad, Y. Usman, A. Muhammad, Temitope Ige, O. Jimoh, S. Aliyu, A. Usman, M. Imam, Z. Tanko, E. Balogun, A. Suleiman","doi":"10.4103/atp.atp_49_20","DOIUrl":null,"url":null,"abstract":"The emergence of coronavirus disease 2019 (COVID-19) has caused global health concerns in the various strata of health-care authorities. The detection of the etiologic agent, SARS-CoV-2 became essential for case identification and prevention of transmission. In this review, literature was retrieved and sifted from different search engines. We highlighted some mainstream pointers vis-à -vis preanalytical, analytical, and postanalytical phases of laboratory detection of SARS-CoV-2 using real-time reverse transcription-polymerase chain reaction (RT-PCR) assay. The quantitative RT-PCR is considered as the gold standard for establishing the diagnosis of COVID-19. However, laboratories must pay attention to all the testing phases from sample collection to final release of results in order to avoid false-negative or false-positive results. It is also necessary to understand possible challenges and conduct risk assessment before the commencement of testing in the designated laboratory.","PeriodicalId":307224,"journal":{"name":"Annals of Tropical Pathology","volume":"28 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Annals of Tropical Pathology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4103/atp.atp_49_20","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The emergence of coronavirus disease 2019 (COVID-19) has caused global health concerns in the various strata of health-care authorities. The detection of the etiologic agent, SARS-CoV-2 became essential for case identification and prevention of transmission. In this review, literature was retrieved and sifted from different search engines. We highlighted some mainstream pointers vis-à -vis preanalytical, analytical, and postanalytical phases of laboratory detection of SARS-CoV-2 using real-time reverse transcription-polymerase chain reaction (RT-PCR) assay. The quantitative RT-PCR is considered as the gold standard for establishing the diagnosis of COVID-19. However, laboratories must pay attention to all the testing phases from sample collection to final release of results in order to avoid false-negative or false-positive results. It is also necessary to understand possible challenges and conduct risk assessment before the commencement of testing in the designated laboratory.