Learning scale-space representation of nucleus for accurate localization and segmentation of epithelial squamous nuclei in cervical smears

S. Karri, Hrushikesh Garud, D. Sheet, J. Chatterjee, Debjani Chakraborty, A. Ray, M. Mahadevappa
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引用次数: 3

Abstract

Computer vision systems are being introduced in pre-screening of cervical cytopathology slides to identify samples that require study by cytopathologists. These systems work on the principle of imaging and analysis of cytology features in general and nuclear features in particular. Thus accurate localization and segmentation of the nuclei is crucial for the systems. Though several methods have been conceptualized, developed and employed to achieve the tasks of localization and segmentation of nuclei in cytology images, most fail to localize nuclei with opened up chromatin. This paper presents a machine learning approach based framework for accurate localization and segmentation of nuclei. The approach uses the random forest model to learn complete scale-space representation of the nuclear chromatin distribution in green and color saturation channels. Based on the multi scale features of an unknown image this model can predict an image such that gray level value of a pixel is proportionate to the probability that the pixel belongs to nuclear region. This predicted image then can be used for accurate localization and segmentation of the nuclei by random walks approach. Accuracy of the system has been tested on a publicly available dataset images and was found to be approximately 97%.
学习核的尺度空间表示,用于宫颈涂片上皮鳞状核的准确定位和分割
计算机视觉系统被引入到宫颈细胞病理学切片的预筛选中,以确定需要细胞病理学家研究的样本。这些系统的工作原理是成像和分析细胞学特征,特别是核特征。因此,精确定位和分割细胞核对系统至关重要。虽然已有几种方法被概念化、发展和应用于实现细胞学图像中细胞核的定位和分割任务,但大多数方法都不能定位染色质打开的细胞核。提出了一种基于机器学习方法的核精确定位和分割框架。该方法使用随机森林模型学习核染色质分布在绿色和颜色饱和度通道中的完整尺度空间表示。基于未知图像的多尺度特征,该模型可以对图像进行预测,使像素的灰度值与像素属于核区域的概率成正比。该预测图像可用于随机游走法对细胞核进行精确定位和分割。该系统的准确性已经在公开可用的数据集图像上进行了测试,发现准确率约为97%。
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