CLONAL DETECTION OF Streptococcus agalactiae Lehmann AND Neumann PARENTAL STRAINS BY RANDOM AMPLIFICATION OF POLYMORPHIC DNA

Cortese, I.J., Novosak M.G., Oviedo P.N., Cannistraci Giolito R.E., M. Laczeski
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Abstract

Streptococcus agalactiae (GBS) causes invasive infections in newborns, being the most frequent the maternal transmission. Epidemiological studies use molecular techniques that assess genetic diversity, including random amplification of polymorphic DNA (RAPD) that is found to be accessible, sensitive and uses arbitrary primers to amplify polymorphic segments of DNA by PCR. The objective was to determine the clonal relationship between GBS strains recovered from mothers and their respective newborns. Four pairs of GBS isolates obtained from vaginal-rectal swabs of mothers and blood cultures of their newborns were studied with RAPD. Primers OPS11, OPB17 and OPB18 were used to select one with the ability to discriminate between non-genetically related strains. The Hunter-Gaston formula that establishes the discrimination index (D) was used; when D>0.90, it is considered that the isolates belong to different clones. The amplification profiles for the eight isolates, using each primer independently, allowed to calculate a D=1 for OPS11, and D=0.84 for OPB17 and OPB18. Therefore, OPS11 was selected for the study of the clonal relationship of the isolates, and similar amplification profiles were found by RAPD for each mother-newborn pair of GBS isolates. Different amplification profiles were observed between pairs of mother-newborn strains, which reveals the discrimination between unrelated strains, confirmed by pulsating field electrophoresis (PFGE). These results indicated vertical transmission for each studied case and robustness of the OPS11 primer. Appropriate conditions of the RAPD trial were found, which is useful for epidemiological studies. Key words: Streptococcus agalactiae, neonatal disease, molecular epidemiology, RAPD technique, vertical transmission
随机扩增多态DNA检测无乳链球菌莱曼和诺伊曼亲本菌株
无乳链球菌(GBS)在新生儿中引起侵袭性感染,是最常见的母体传播。流行病学研究使用分子技术来评估遗传多样性,包括随机扩增多态DNA (RAPD),这被发现是可获得的,敏感的,并使用任意引物通过PCR扩增DNA的多态片段。目的是确定从母亲和各自的新生儿中恢复的GBS菌株之间的克隆关系。采用RAPD方法对从母亲阴道直肠拭子及其新生儿血培养中分离的四对GBS进行了研究。利用引物OPS11、OPB17和OPB18筛选具有非遗传相关菌株区分能力的引物。采用建立辨别指数(D)的Hunter-Gaston公式;当D>0.90时,认为分离物属于不同的克隆。每个引物分别对8个分离株进行扩增,计算出OPS11的扩增谱D=1, OPB17和OPB18的扩增谱D=0.84。因此,选择OPS11进行分离株克隆关系的研究,并通过RAPD对每对GBS母-新生儿分离株进行相似的扩增谱分析。经脉冲场电泳(PFGE)证实,母株和新生儿菌株之间存在不同的扩增谱,表明存在不相关菌株的差异。这些结果表明每个研究病例的垂直传播和OPS11引物的稳健性。发现了适宜的RAPD试验条件,为流行病学研究提供了参考。关键词:无乳链球菌,新生儿疾病,分子流行病学,RAPD技术,垂直传播
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