The Parallelization of Three-Dimensional Electro-magnetic Particle Model Using Both MPI and OPENMP

Xiaoyang Yan, Weiweng Zhang, Huifang Deng, S. Bu
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引用次数: 4

Abstract

Three-Dimensional Electro-Magnetic Particle Model (3DEMPM), based on the equations of Maxwell and Newton-Lorentz, takes advantages of the Finite-Difference Time-Domain (FDTD) and Particle-In-Cell (PIC) to trace a large quantity of particles in order to gain insight into the physics of them. Although MPI alone can be used to parallelize with 1D decomposition along x-direction, the efficiency decreases with increase of CPUs because there are more communications involved. We combine MPI and OPENMP to reduce the communications in the PC cluster, one node of which shares memory with duel-core. The whole domain is decomposed into several sub-domains, the same number as the nodes. Between the nodes we use MPI to realize the communications, and inside each node the OPENMP is applied to do the parallel computing with no communication. In this way, the higher speed-up is achieved while the communication is reduced.
基于MPI和OPENMP的三维电磁粒子模型并行化
三维电磁粒子模型(3DEMPM)以麦克斯韦方程和牛顿-洛伦兹方程为基础,利用时域有限差分(FDTD)和细胞内粒子(PIC)技术对大量粒子进行跟踪,从而深入了解粒子的物理性质。虽然MPI可以单独用于x方向的一维分解并行化,但由于涉及到更多的通信,效率会随着cpu的增加而降低。我们将MPI和OPENMP结合起来,减少PC集群中的通信,其中一个节点与双核共享内存。整个域被分解成若干个子域,每个子域与节点数量相同。节点间采用MPI实现通信,节点内部采用OPENMP实现并行计算,无需通信。这样可以在减少通信的同时获得更高的速度。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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