The Mechanism of Action of Qihuang Jiangtang Capsule in the Treatment of Type 2 Diabetes Based on Network Pharmacology and Molecular Docking Technology

Mengmeng Ji, Ya-Nan Yu, Jiarui Wu, Jun Liu, Yanhua Jiang, Zhiwei Jing
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Abstract

Objective Our objective was to investigate the potential mechanism of action of Qihuang Jiangtang capsule (QHJTC) in the treatment of type 2 diabetes mellitus (T2DM) through network pharmacology and molecular docking. Methods The active components of materia medica in the formula of QHJTC were searched on the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform and Encyclopedia of Traditional Chinese Medicine. The targets related to the active components were obtained via PubChem database. The targets related to T2DM were retrieved through the GeneCards database. The targets corresponding to the active components and diabetes mellitus were uploaded to the Venn diagrams website to get the Venn diagram, and the intersecting targets were the potential targets of QHJTC in treating T2DM. The active components and potential targets were imported into Cytoscape 3.7.2 software to construct the active component–potential target network, and the key compounds and targets were screened by the Network Analyzer module in the Tools module. The potential targets were imported into the STRING database to obtain the interaction relationships, so as to analyze and construct the protein–protein interaction (PPI) network by Cytoscape 3.7.2 software. The intersecting targets were introduced into Metascape for gene ontology (GO) functional enrichment analysis and Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analysis. The top 20 signaling pathways obtained by the KEGG pathway enrichment analysis and the related targets and the corresponding targets were analyzed by using Cytoscape 3.7.2 software to construct the “active component–important target-key pathway network ” for the intervention of T2DM with QHJTC. The molecular docking of active components and core targets was performed with AutoDock software. Results A total of 237 active components and 281 related targets were obtained from QHJTC, as well as 1 362 T2DM targets and 155 potential targets of QHJTC in treating T2DM. There were 32 key components and 49 key targets identified by the active component–potential target network topology analysis. There were 471 terms obtained from GO functional enrichment analysis, among which 248 related to biological processes, 125 related to molecular functions, and 98 related to cellular components. There were 299 signaling pathways obtained from KEGG pathway enrichment analysis. The active components of QHJTC were found spontaneously binding to the core targets. Conclusions QHJTC can treat T2DM through multi-components, multi-targets, and multi-pathways.
基于网络药理学和分子对接技术的芪黄降糖胶囊治疗2型糖尿病的作用机制研究
目的通过网络药理学和分子对接研究芪黄降糖胶囊治疗2型糖尿病(T2DM)的潜在作用机制。方法在中国中医系统药理学数据库与分析平台、中国中医大百科全书中检索中药复方中有效成分。通过PubChem数据库获取与活性成分相关的靶标。T2DM相关指标通过GeneCards数据库检索。将活性成分与糖尿病对应的靶点上传到维恩图网站,得到维恩图,相交靶点为QHJTC治疗T2DM的潜在靶点。将活性成分和潜在目标导入Cytoscape 3.7.2软件构建活性成分-潜在目标网络,通过Tools模块中的network Analyzer模块筛选关键化合物和目标。将潜在靶点导入STRING数据库,获取相互作用关系,利用Cytoscape 3.7.2软件分析构建蛋白-蛋白相互作用(PPI)网络。将交叉靶点引入metscape中进行基因本体(GO)功能富集分析和京都基因与基因组百科全书(KEGG)途径富集分析。利用Cytoscape 3.7.2软件对KEGG通路富集分析得到的前20条信号通路及相关靶点及对应靶点进行分析,构建QHJTC干预T2DM的“活性组分-重要靶点-关键通路网络”。利用AutoDock软件进行活性成分与核心靶点的分子对接。结果共检出有效成分237种,相关靶点281个,T2DM靶点1 362个,治疗T2DM的潜在靶点155个。通过有源-潜在目标网络拓扑分析,确定了32个关键组件和49个关键目标。氧化石墨烯功能富集分析共获得471个词条,其中248个与生物过程相关,125个与分子功能相关,98个与细胞组分相关。KEGG通路富集分析得到299条信号通路。发现QHJTC的活性成分自发地与核心靶点结合。结论清心汤治疗T2DM具有多成分、多靶点、多通路的作用。
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