Genetic relationships in a germplasm collection of Camellia japonica and Camellia oleifera using SSR analysis.

Y. Zhao, C. Ruan, G. Ding, S. Mopper
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引用次数: 14

Abstract

Camellia japonica produces different color and bigger flowers, widely being used for gardening green in southern China. However, cultivars were introduced from different regions, but their origin and pedigree information is either not available poorly documented, causing problems in authentication. Many low-yield trees in Camellia oleifera forests have been used as stocks for grafting C. japonica. However, the survival rate of grafts between these two species is related to genetic relationship between stock of C. oleifera and scion of C. japonica. We used simple sequence repeat (SSR) markers to genotype 41 C. japonica cultivars from different regions, as well as nine genotypes of C. oleifera in China. Twenty-one SSR markers generated 438 alleles, with an average of 20.85 alleles per locus. All alleles were used to generate Dice coefficients between two genotypes of all genotypes of these two species. Cluster analysis based on SSR data clustered genotypes showed clustering of genotypes into groups that agreed well with their taxonomic classification and geographic origin. Cultivar 'Damaonao' was a large tree with flowers of composite color, and showed the most genetic distance from other C. japonica cultivars and C. oleifera genotypes in the cluster analysis. The cultivars of C. japonica are distinct from genotypes of C. oleifera. The results for cultivars of C. japonica also revealed the presence of different cultivars with the same name, and identical cultivars but with a different name. SSR profiles can improve C. japonica germplasm management, and provide potential determine correlations between genetic relationship and graft compatibility among scions of C. japonica and genotypes of C. oleifera.
利用SSR分析日本山茶和油茶种质资源的亲缘关系。
山茶(Camellia japonica)的花颜色不同,尺寸较大,在中国南方被广泛用于园林绿化。然而,由于品种来自不同的地区,但其来源和系谱信息缺乏,导致鉴定存在问题。油茶林中的许多低产树木已被用作嫁接日本山茶的砧木。然而,两种嫁接的成活率与油菜砧木与粳稻接穗的亲缘关系有关。利用SSR (simple sequence repeat)标记对来自不同地区的41个粳稻品种和中国9个油菜花基因型进行基因型分析。21个SSR标记产生438个等位基因,平均每个位点有20.85个等位基因。利用所有等位基因对这两个物种的所有基因型进行2个基因型间的Dice系数计算。基于SSR聚类数据的聚类分析表明,聚类结果与基因型的分类和地理来源一致。品种‘大毛糯’是一种花色复合的大乔木,与其他粳稻品种和油茶基因型的遗传距离最大。粳稻品种不同于油菜花的基因型。对粳稻品种的分析结果也显示,粳稻品种中存在不同品种名称相同和相同品种名称不同的现象。SSR图谱可以提高粳稻种质资源管理水平,并为粳稻接穗间亲缘关系和嫁接亲和性与油菜基因型之间的相关性提供潜在的确定依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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