Tandem mass tag-based quantitative proteomic analysis of cervical cancer.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Mohammed F Aljawad, Abdul Hussein M Al Faisal, Mohammed F Alqanbar, Phillip A Wilmarth, Basima Q Hassan
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引用次数: 3

Abstract

Background: Cervical cancer is a common cancer in women caused by high-risk human papillomavirus (Hr-HPV). Many potential biomarkers have been proposed for precancerous lesions and cancer diagnosis and some of these markers studied for prognosis. This study determined potential biomarkers for cervical cancer diagnosis in regard to HPV genotype by using isobaric labeling quantitative proteomics.

Methods: in the current study, there were 75 formalin fixed paraffin embedded (FFPE) uterine cervical samples that used to determine the 14 HPV genotypes and the viral load of each genotype was determined. The tandem mass tag (TMT) proteomic work was performed on four FFPE samples of cervical cancer and four FFPE of control samples. The validation of biomarkers from cervical proteome were evaluated using Immunohistochemistry (IHC) testing.

Results: The most frequent HPV genotype among all other genotypes was HPV 16. There were 2753 proteins quantified by TMT and 336 of these proteins had significant differential abundances. KPNA2, MCM2, COL1A1, and DCN were selected based on functional enrichment analysis and validated by Immunohistochemistry (IHC) testing. The staining of IHC confirmed the upregulation of KPNA2 and MCM2 expression in cervical neoplasia and the downregulation of DCN and COL1A1 in some cervical cancer group subjects.

Conclusion: The KPNA2 marker was compared to other previously reported biomarkers and is a putative biomarker to be validated in further studies, specifically the relationship with HPV load.

基于串联质量标记的宫颈癌定量蛋白质组学分析。
背景:宫颈癌是由高危人乳头瘤病毒(Hr-HPV)引起的女性常见癌症。许多潜在的生物标志物已被提出用于癌前病变和癌症诊断,其中一些标志物被研究用于预后。本研究通过使用等压标记定量蛋白质组学确定宫颈癌诊断中与HPV基因型相关的潜在生物标志物。方法:本研究选取75份福尔马林固定石蜡包埋(FFPE)宫颈标本,用于检测14种HPV基因型,并测定每种基因型的病毒载量。对4例宫颈癌FFPE样本和4例对照组FFPE样本进行串联质量标签(TMT)蛋白质组学研究。应用免疫组织化学(IHC)检测评估宫颈蛋白质组生物标志物的有效性。结果:在所有基因型中,HPV基因型以hpv16最为常见。共有2753个蛋白被TMT定量,其中336个蛋白丰度差异显著。根据功能富集分析选择KPNA2、MCM2、COL1A1和DCN,并通过免疫组化(IHC)检测进行验证。免疫组化染色证实宫颈肿瘤组织中KPNA2、MCM2表达上调,部分宫颈癌组患者DCN、COL1A1表达下调。结论:KPNA2标记物与其他先前报道的生物标记物进行了比较,并且是一个假定的生物标记物,需要在进一步的研究中验证,特别是与HPV载量的关系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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