A Genomic Analysis of Bacillus megaterium HT517 Reveals the Genetic Basis of Its Abilities to Promote Growth and Control Disease in Greenhouse Tomato.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Wei Yang, Yingnan Zhao, Yang Yang, Minshuo Zhang, Xiaoxi Mao, Yanjie Guo, Xiangyu Li, Bu Tao, Yongzhi Qi, Li Ma, Wenju Liu, Bowen Li, Hong J Di
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引用次数: 1

Abstract

Bacillus megaterium is well known as a plant growth-promoting rhizobacterium, but the relevant molecular mechanisms remain unclear. This study aimed to elucidate the effects of B. megaterium HT517 on the growth and development of and the control of disease in greenhouse tomato and its mechanism of action. A pot experiment was conducted to determine the effect of B. megaterium on tomato growth, and this experiment included the HT517 group (3.2 × 108 cfu/pot) and the control group (inoculated with the same amount of sterilized suspension). An antagonistic experiment and a plate confrontation experiment were conducted to study the antagonistic effect of B. megaterium and Fusarium oxysporum f.sp. lycopersici. Liquid chromatography-mass spectrometry was used to determine the metabolite composition and metabolic pathway of HT517. PacBio+Illumina HiSeq sequencing was utilized for map sequencing of the samples. An in-depth analysis of the functional genes related to the secretion of these substances by functional bacteria was conducted. HT517 could secrete organic acids that solubilize phosphorus, promote root growth, secrete auxin, which that promotes early flowering and fruiting, and alkaloids, which control disease, and reduce the incidence of crown rot by 51.0%. The complete genome sequence indicated that the strain comprised one circular chromosome with a length of 5,510,339 bp (including four plasmids in the genome), and the GC content accounted for 37.95%. Seven genes (pyk, aceB, pyc, ackA, gltA, buk, and aroK) related to phosphate solubilization, five genes (trpA, trpB, trpS, TDO2, and idi) related to growth promotion, eight genes (hpaB, pheS, pheT, ileS, pepA, iucD, paaG, and kamA) related to disease control, and one gene cluster of synthetic surfactin were identified in this research. The identification of molecular biological mechanisms for extracellular secretion by the HT517 strain clarified that its organic acids solubilized phosphorus, that auxin promoted growth, and that alkaloids controlled tomato diseases.

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巨芽孢杆菌HT517的基因组分析揭示了其促进温室番茄生长和防治病害能力的遗传基础。
巨芽孢杆菌是一种促进植物生长的根瘤菌,但其分子机制尚不清楚。本研究旨在阐明巨芽孢杆菌HT517对温室番茄生长发育和病害防治的影响及其作用机制。采用盆栽试验研究巨芽孢杆菌对番茄生长的影响,试验分为HT517组(3.2 × 108 cfu/盆栽)和对照组(接种等量的灭菌悬浮液)。采用拮抗实验和平板对抗实验研究了大芽孢杆菌和尖孢镰刀菌的拮抗作用。黄瓜。采用液相色谱-质谱法测定HT517的代谢产物组成及代谢途径。采用PacBio+Illumina HiSeq测序对样品进行图谱测序。对功能菌分泌这些物质的相关功能基因进行了深入分析。HT517能分泌溶解磷、促进根系生长的有机酸,能分泌促进早花早结实的生长素和防治病害的生物碱,使冠腐病发病率降低51.0%。全基因组测序结果表明,该菌株由1条环状染色体组成,全长5,510,339 bp(包括基因组中的4个质粒),GC含量占37.95%。本研究共鉴定出7个与磷酸盐溶解相关的基因(pyk、aceB、pyc、ackA、gltA、buk、aroK), 5个与生长促进相关的基因(trpA、trpB、trpS、TDO2、idi), 8个与疾病控制相关的基因(hpaB、pheS、pheT、ileS、pepA、iucD、paaG、kamA), 1个合成表面素基因簇。HT517菌株胞外分泌的分子生物学机制明确了其有机酸溶解磷,生长素促进生长,生物碱控制番茄疾病。
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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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