Postzygotic mutations and where to find them – Recent advances and future implications in the field of non-neoplastic somatic mosaicism

IF 6.4 2区 医学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Krystyna Wasilewska , Tomasz Gambin , Małgorzata Rydzanicz , Krzysztof Szczałuba , Rafał Płoski
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引用次数: 2

Abstract

The technological progress of massively parallel sequencing (MPS) has triggered a remarkable development in the research on postzygotic mutations. Although the overwhelming majority of studies in the field focus on oncogenesis, non-neoplastic diseases are attracting more and more attention. The aim of this review was to summarize some of the most recent findings in the field of somatic mosaicism in diseases other than neoplastic events. We discuss the abundance and role of postzygotic mutations, with a special emphasis on disorders which occur only in a mosaic form (obligatory mosaic diseases; OMDs). Based on the list of OMDs compiled from the published literature and three databases (OMIM, Orphanet and MosaicBase), we demonstrate the prevalence of cancer-related genes across OMDs and suggest other sources to further explore OMDs and OMD-related genes. Additionally, we comment on some practical aspects related to mosaic diseases, such as approaches to tissue sampling, the MPS coverage required to detect variants at a very low frequency, as well as on bioinformatic and molecular tools dedicated to detect somatic mutations in MPS data.

合子后突变及其在何处发现——非肿瘤性体细胞嵌合领域的最新进展及其未来意义
大规模平行测序(MPS)技术的进步引发了对受精卵后突变研究的显著发展。尽管该领域的绝大多数研究都集中在肿瘤发生上,但非肿瘤性疾病也越来越受到人们的关注。这篇综述的目的是总结体细胞嵌合现象在肿瘤以外的疾病中的最新发现。我们讨论了合子后突变的丰度和作用,特别强调了仅以马赛克形式发生的疾病(强制性马赛克病;证明omd)。基于已发表的文献和三个数据库(OMIM, Orphanet和MosaicBase)编制的omd列表,我们证明了癌症相关基因在omd中的患病率,并建议其他来源进一步探索omd和omd相关基因。此外,我们还评论了与花叶病相关的一些实际方面,例如组织采样方法,以极低频率检测变异所需的MPS覆盖范围,以及用于检测MPS数据中体细胞突变的生物信息学和分子工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
12.20
自引率
1.90%
发文量
22
审稿时长
15.7 weeks
期刊介绍: The subject areas of Reviews in Mutation Research encompass the entire spectrum of the science of mutation research and its applications, with particular emphasis on the relationship between mutation and disease. Thus this section will cover advances in human genome research (including evolving technologies for mutation detection and functional genomics) with applications in clinical genetics, gene therapy and health risk assessment for environmental agents of concern.
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