Rate-Limiting Enzymes in Cardiometabolic Health and Aging in Humans.

IF 2 4区 医学 Q3 GENETICS & HEREDITY
Lifestyle Genomics Pub Date : 2023-01-01 Epub Date: 2023-07-20 DOI:10.1159/000531350
Laurence D Parnell, Kira S McCaffrey, Athena W Brooks, Caren E Smith, Chao-Qiang Lai, Jacob J Christensen, Christopher D Wiley, Jose M Ordovas
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引用次数: 0

Abstract

Introduction: Rate-limiting enzymes (RLEs) are innate slow points in metabolic pathways, and many function in bio-processes related to nutrient sensing. Many RLEs carry causal mutations relevant to inherited metabolic disorders. Because the activity of RLEs in cardiovascular health is poorly characterized, our objective was to assess their involvement in cardiometabolic health and disease and where altered biophysical and biochemical functions can promote disease.

Methods: A dataset of 380 human RLEs was compared to protein and gene datasets for factors likely to contribute to cardiometabolic disease, including proteins showing significant age-related altered expression in blood and genetic loci with variants that associate with common cardiometabolic phenotypes. The biochemical reactions catalyzed by RLEs were evaluated for metabolites enriched in RLE subsets associating with various cardiometabolic phenotypes. Most significance tests were based on Z-score enrichment converted to p values with a normal distribution function.

Results: Of 380 RLEs analyzed, 112 function in mitochondria, and 53 are assigned to inherited metabolic disorders. There was a depletion of RLE proteins known as aging biomarkers. At the gene level, RLEs were assessed for common genetic variants that associated with important cardiometabolic traits of LDL-cholesterol or any of the five outcomes pertinent to metabolic syndrome. This revealed several RLEs with links to cardiometabolic traits, from a minimum of 26 for HDL-cholesterol to a maximum of 45 for plasma glucose. Analysis of these GWAS-linked RLEs for enrichment of the molecular constituents of the catalyzed reactions disclosed a number of significant phenotype-metabolite links. These included blood pressure with acetate (p = 2.2 × 10-4) and NADP+ (p = 0.0091), plasma HDL-cholesterol and triglyceride with diacylglycerol (p = 2.6 × 10-5, 6.4 × 10-5, respectively) and diolein (p = 2.2 × 10-6, 5.9 × 10-6), and waist circumference with d-glucosamine-6-phosphate (p = 1.8 × 10-4).

Conclusion: In the context of cardiometabolic health, aging, and disease, these results highlight key diet-derived metabolites that are central to specific rate-limited processes that are linked to cardiometabolic health. These metabolites include acetate and diacylglycerol, pertinent to blood pressure and triglycerides, respectively, as well as diacylglycerol and HDL-cholesterol.

人类心脏代谢健康和衰老中的限速酶。
引言:限速酶(RLEs)是代谢途径中固有的慢点,在与营养感知相关的生物过程中发挥着许多作用。许多RLE携带与遗传性代谢紊乱相关的因果突变。由于RLE在心血管健康中的活性特征不明确,我们的目的是评估它们在心脏代谢健康和疾病中的作用,以及生物物理和生物化学功能的改变在哪里会促进疾病。方法:将380个人类RLE的数据集与可能导致心脏代谢疾病的因素的蛋白质和基因数据集进行比较,包括在血液中显示出与年龄相关的显著改变表达的蛋白质,以及与常见心脏代谢表型相关的变异的遗传基因座。评估了RLE催化的生化反应中富含与各种心脏代谢表型相关的RLE亚群的代谢物。大多数显著性检验都是基于Z分数的富集,用正态分布函数转换为p值。结果:在分析的380个RLE中,112个在线粒体中起作用,53个属于遗传性代谢紊乱。被称为衰老生物标志物的RLE蛋白缺失。在基因水平上,RLE被评估为与LDL胆固醇的重要心脏代谢特征或与代谢综合征相关的五种结果中的任何一种相关的常见遗传变异。这揭示了几个与心脏代谢特征有关的RLE,从高密度脂蛋白胆固醇的最低26到血糖的最高45。用于富集催化反应的分子成分的这些GWAS连接的RLE的分析揭示了许多显著的表型代谢物连接。其中包括乙酸盐(p=2.2×10-4)和NADP+(p=0.0091)的血压,二酰基甘油(p=2.6×10-5,6.4×10-5)和二醇(p=2.2x10-6,5.9×10-6)的血浆高密度脂蛋白胆固醇和甘油三酯,以及d-葡糖胺-6-磷酸的腰围(p=1.8×10-4)。结论:在心脏代谢健康、衰老和疾病的背景下,这些结果突出了关键的饮食衍生代谢产物,这些代谢产物是与心脏代谢健康相关的特定限速过程的核心。这些代谢产物包括分别与血压和甘油三酯有关的乙酸盐和二酰甘油,以及二酰甘油和高密度脂蛋白胆固醇。
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来源期刊
Lifestyle Genomics
Lifestyle Genomics Agricultural and Biological Sciences-Food Science
CiteScore
4.00
自引率
7.70%
发文量
11
审稿时长
28 weeks
期刊介绍: Lifestyle Genomics aims to provide a forum for highlighting new advances in the broad area of lifestyle-gene interactions and their influence on health and disease. The journal welcomes novel contributions that investigate how genetics may influence a person’s response to lifestyle factors, such as diet and nutrition, natural health products, physical activity, and sleep, amongst others. Additionally, contributions examining how lifestyle factors influence the expression/abundance of genes, proteins and metabolites in cell and animal models as well as in humans are also of interest. The journal will publish high-quality original research papers, brief research communications, reviews outlining timely advances in the field, and brief research methods pertaining to lifestyle genomics. It will also include a unique section under the heading “Market Place” presenting articles of companies active in the area of lifestyle genomics. Research articles will undergo rigorous scientific as well as statistical/bioinformatic review to ensure excellence.
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