Epidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods.

IF 1.1 4区 农林科学 Q3 FISHERIES
Peter Smith, Laëtitia Le Devendec, Eric Jouy, Emeline Larvor, Alain Le Breton, Sara Picon-Camacho, Snježana Zrnčić, Ivana Giovanna Zupičić, Dražen Oraić, Süheyla Karataş, David Verner-Jeffreys, Andrew Wokorac Joseph, Edel Light, Alieda van Essen-Zandbergen, Betty van Gelderen, Michal Voorbergen-Laarman, Olga L M Haenen, Kees T Veldman, Lone Madsen, Kári K Mouritsen, Cecilie Smith Svanevik, Fredrik Håkonsholm, Ana Isabel Vela, María García, Daniela Florio, Marialetizia Fioravanti, Luana Cortinovis, Tobia Pretto, Amedeo Manfrin, Sandrine Baron
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引用次数: 0

Abstract

This work aims to generate the data needed to set epidemiological cut-off values for minimum inhibitory concentration (MIC) and disc-diffusion zone measurements of Vibrio anguillarum. A total of 261 unique isolates were tested, applying standard methods specifying incubation at 28°C for 24-28 h. Aggregated MIC distributions for a total of 247 isolates were determined in 9 laboratories for 11 agents. Data aggregations of the disc zone for the 10 agents analysed contained between 157 and 218 observations made by 4 to 7 laboratories. Acceptable ranges for quality control (QC) reference strains were available for 7 agents and the related multi-laboratory aggregated data were censored, excluding the data of a laboratory that failed to meet QC requirements. Statistical methods were applied to calculate epidemiological cut-off values. Cut-off values for MIC data were calculated for florfenicol (≤1 µg ml-1), gentamicin (≤4 µg ml-1), oxytetracycline (≤0.25 µg ml-1) and trimethoprim/sulfamethoxazole (≤0.125/2.38 µg ml-1). The cut-off values for disc zone data were calculated for enrofloxacin (≥29 mm), florfenicol (≥27 mm), gentamicin (≥19 mm), oxolinic acid (≥24 mm), oxytetracycline (≥24 mm) and trimethoprim/sulfamethoxazole (≥26 mm). MIC and disc-diffusion zone data for the other agents where not supported by QC, thus yielding only provisional cut-off values (meropenem, ceftazidime). Regardless of whether QC is available, some of the aggregated MIC distributions (enrofloxacin, oxolinic acid), disc zone (sulfamethoxazole), and MIC and disc-diffusion distributions (ampicillin, chloramphenicol) did not meet the statistical requirements. The data produced will be submitted to the Clinical Laboratory Standards Institute for their consideration in setting international consensus epidemiological cut-off values.

标准化方法生成的鳗弧菌MIC和椎间盘扩散数据的流行病学临界值。
本研究旨在为鳗弧菌的最小抑制浓度(MIC)和圆盘扩散区测量提供所需的流行病学临界值。采用28°C培养24-28小时的标准方法,共检测了261株独特的分离株。在9个实验室对11种药物确定了总共247株分离株的总体MIC分布。所分析的10种药剂的圆盘区数据汇总包括4至7个实验室所作的157至218次观察。7种制剂的质量控制(QC)参考菌株可接受范围,并对相关的多实验室汇总数据进行审查,排除了不符合QC要求的实验室的数据。采用统计学方法计算流行病学临界值。对氟苯尼考(≤1µg ml-1)、庆大霉素(≤4µg ml-1)、土霉素(≤0.25µg ml-1)和甲氧苄啶/磺胺甲恶唑(≤0.125/2.38µg ml-1)的MIC数据计算截止值。计算恩诺沙星(≥29 mm)、氟苯尼科(≥27 mm)、庆大霉素(≥19 mm)、oxolineacid(≥24 mm)、土霉素(≥24 mm)和甲氧苄啶/磺胺甲恶唑(≥26 mm)的盘区数据的截止值。其他药物的MIC和磁盘扩散区数据没有QC支持,因此只能得到临时临界值(美罗培南、头孢他啶)。无论是否有QC,一些聚集MIC分布(恩诺沙星、oxoline酸)、盘区(磺胺甲恶唑)以及MIC和盘扩散分布(氨苄西林、氯霉素)不符合统计要求。所产生的数据将提交给临床实验室标准协会,供其在制定国际共识流行病学临界值时考虑。
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来源期刊
Diseases of aquatic organisms
Diseases of aquatic organisms 农林科学-兽医学
CiteScore
3.10
自引率
0.00%
发文量
53
审稿时长
8-16 weeks
期刊介绍: DAO publishes Research Articles, Reviews, and Notes, as well as Comments/Reply Comments (for details see DAO 48:161), Theme Sections and Opinion Pieces. For details consult the Guidelines for Authors. Papers may cover all forms of life - animals, plants and microorganisms - in marine, limnetic and brackish habitats. DAO''s scope includes any research focusing on diseases in aquatic organisms, specifically: -Diseases caused by coexisting organisms, e.g. viruses, bacteria, fungi, protistans, metazoans; characterization of pathogens -Diseases caused by abiotic factors (critical intensities of environmental properties, including pollution)- Diseases due to internal circumstances (innate, idiopathic, genetic)- Diseases due to proliferative disorders (neoplasms)- Disease diagnosis, treatment and prevention- Molecular aspects of diseases- Nutritional disorders- Stress and physical injuries- Epidemiology/epizootiology- Parasitology- Toxicology- Diseases of aquatic organisms affecting human health and well-being (with the focus on the aquatic organism)- Diseases as indicators of humanity''s detrimental impact on nature- Genomics, proteomics and metabolomics of disease- Immunology and disease prevention- Animal welfare- Zoonosis
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