Post-mortem genetic analysis of sudden unexplained death in a young cohort: a whole-exome sequencing study.

IF 2.3 3区 医学 Q1 MEDICINE, LEGAL
International Journal of Legal Medicine Pub Date : 2023-11-01 Epub Date: 2023-08-25 DOI:10.1007/s00414-023-03075-1
Shouyu Wang, Yongsheng Chen, Jianghua Du, Zhimin Wang, Zijie Lin, Guanghui Hong, Dong Qu, Yiwen Shen, Liliang Li
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Abstract

Sudden unexplained death (SUD) constitutes a considerable portion of unexpected sudden death in the young. Molecular autopsy has proved to be an efficient diagnostic tool in the multidisciplinary management of SUD. Yet, many cases remain undiagnosed using the widely adopted targeted genetic screening strategies. Here, we investigated the genetic substrates of a young SUD cohort (18-40 years old) from China using whole-exome sequencing (WES), with the primary aim to identify novel SUD susceptibility genes. Within 255 previously acknowledged SUD-associated genes, 21 variants with likely functional effects (pathogenic/likely pathogenic) were identified in 51.9% of the SUD cases. More importantly, a set of 33 candidate genes associated with myopathy were identified to be novel susceptibility genes for SUD. Comparative analysis of the cumulative PHRED-scaled CADD score and polygenetic burden score showed that the amount and deleteriousness of variants in the 255 SUD-associated genes and the 33 candidate genes identified by this study were significantly higher compared with 289 randomly selected genes. A significantly higher genetic burden of rare variants (MAF < 0.1%) in the 33 candidate genes also highlighted putative roles of these genes in SUD. After incorporating these novel genes, the genetic testing yields of the current SUD cohort elevated from 51.9 to 66.7%. Our study expands understanding of the genetic variants underlying SUD and presents insights that improve the utility of genetic screenings.

年轻队列中不明原因猝死的尸检基因分析:一项完整的外显子组测序研究。
不明原因猝死(SUD)在年轻人的意外猝死中占相当大的比例。分子尸检已被证明是SUD多学科管理的有效诊断工具。然而,使用广泛采用的有针对性的基因筛查策略,许多病例仍未得到诊断。在这里,我们使用全外显子组测序(WES)研究了来自中国的一个年轻SUD队列(18-40岁)的遗传底物,主要目的是鉴定新的SUD易感基因。在255个先前公认的SUD相关基因中,在51.9%的SUD病例中发现了21种可能具有功能影响(致病性/可能致病性)的变体。更重要的是,一组33个与肌病相关的候选基因被鉴定为SUD的新易感性基因。对累积PHRED量表CADD评分和多基因负荷评分的比较分析表明,与随机选择的289个基因相比,本研究鉴定的255个SUD相关基因和33个候选基因的变异量和毒性显著较高。罕见变异的遗传负担显著增加(MAF
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来源期刊
CiteScore
5.80
自引率
9.50%
发文量
165
审稿时长
1 months
期刊介绍: The International Journal of Legal Medicine aims to improve the scientific resources used in the elucidation of crime and related forensic applications at a high level of evidential proof. The journal offers review articles tracing development in specific areas, with up-to-date analysis; original articles discussing significant recent research results; case reports describing interesting and exceptional examples; population data; letters to the editors; and technical notes, which appear in a section originally created for rapid publication of data in the dynamic field of DNA analysis.
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