动脉粥样硬化相关生物标志物 PABPC1 可预测泛癌症事件。

IF 4.4 1区 医学 Q1 CLINICAL NEUROLOGY
Miao Lin, Liubing Hu, Si Shen, Jiyue Liu, Yanyan Liu, Yixian Xu, Honglin Chen, Kazuo Sugimoto, Jianshuang Li, Ikuo Kamitsukasa, Takaki Hiwasa, Hao Wang, Anding Xu
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引用次数: 0

摘要

背景:动脉粥样硬化(AS)和肿瘤是导致全球死亡的主要原因,它们具有共同的危险因素、检测方法和分子标记物。因此,寻找强直性脊柱炎和肿瘤共有的血清标记物有利于患者的早期诊断:方法:通过重组 cDNA 表达克隆(SEREX)进行抗原血清学鉴定,对 23 例强直性脊柱炎相关短暂性缺血发作患者的血清进行筛选,并确定了 cDNA 克隆。对 cDNA 克隆进行通路功能富集分析,以确定其生物通路,并确定它们是否与强直性脊柱炎或肿瘤有关。随后,进行基因与基因、蛋白质与蛋白质之间的相互作用,发现与强直性脊柱炎相关的标志物。研究人员探讨了强直性脊柱炎生物标志物在人体正常器官和泛癌症肿瘤组织中的表达。然后,评估了各种免疫细胞的免疫浸润水平和肿瘤突变负荷。生存曲线分析显示了AS标记物在泛癌症中的表达情况:结果:用 SEREX 筛选了 AS 相关血清,获得了 83 个高同源性 cDNA 克隆。通过功能富集分析,发现其功能与AS和肿瘤功能密切相关。经过多重生物信息交互筛选和外部队列验证,发现聚(A)结合蛋白胞质 1(PABPC1)是一个潜在的强直性脊柱炎生物标志物。为了评估PABPC1是否与泛癌症相关,研究人员筛选了其在不同肿瘤病理分期和年龄中的表达情况。由于AS相关蛋白与癌症免疫浸润密切相关,我们研究发现PABPC1在泛癌症中也有同样的作用。最后,Kaplan-Meier生存曲线分析表明,泛癌中PABPC1的高表达与高死亡风险相关:通过SEREX和生物信息学泛癌分析结果,我们认为PABPC1可作为预测和诊断强直性脊柱炎和泛癌的潜在生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Atherosclerosis-related biomarker PABPC1 predicts pan-cancer events.

Background: Atherosclerosis (AS) and tumours are the leading causes of death worldwide and share common risk factors, detection methods and molecular markers. Therefore, searching for serum markers shared by AS and tumours is beneficial to the early diagnosis of patients.

Methods: The sera of 23 patients with AS-related transient ischaemic attack were screened by serological identification of antigens through recombinant cDNA expression cloning (SEREX), and cDNA clones were identified. Pathway function enrichment analysis was performed on cDNA clones to identify their biological pathways and determine whether they were related to AS or tumours. Subsequently, gene-gene and protein-protein interactions were performed and AS-associated markers would be discovered. The expression of AS biomarkers in human normal organs and pan-cancer tumour tissues were explored. Then, immune infiltration level and tumour mutation burden of various immune cells were evaluated. Survival curves analysis could show the expression of AS markers in pan-cancer.

Results: AS-related sera were screened by SEREX, and 83 cDNA clones with high homology were obtained. Through functional enrichment analysis, it was found that their functions were closely related to AS and tumour functions. After multiple biological information interaction screening and the external cohort validating, poly(A) binding protein cytoplasmic 1 (PABPC1) was found to be a potential AS biomarker. To assess whether PABPC1 was related to pan-cancer, its expression in different tumour pathological stages and ages was screened. Since AS-associated proteins were closely related to cancer immune infiltration, we investigated and found that PABPC1 had the same role in pan-cancer. Finally, analysis of Kaplan-Meier survival curves revealed that high PABPC1 expression in pan-cancer was associated with high risk of death.

Conclusions: Through the findings of SEREX and bioinformatics pan-cancer analysis, we concluded that PABPC1 might serve as a potential biomarker for the prediction and diagnosis of AS and pan-cancer.

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来源期刊
Stroke and Vascular Neurology
Stroke and Vascular Neurology Medicine-Cardiology and Cardiovascular Medicine
CiteScore
11.20
自引率
1.70%
发文量
63
审稿时长
15 weeks
期刊介绍: Stroke and Vascular Neurology (SVN) is the official journal of the Chinese Stroke Association. Supported by a team of renowned Editors, and fully Open Access, the journal encourages debate on controversial techniques, issues on health policy and social medicine.
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