数据独立采集质谱揭示了遗传性甲状腺转蛋白淀粉样变性(ATTRv)患者自然史中的全面血浆蛋白谱。

IF 3.8 3区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Shan He, XinYue He, RuoKai Pan, LuRong Pan, Xiaoying Lv, YuTong Jin, Yue Fan, YuTong Wang, Zhuang Tian, ShuYang Zhang
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引用次数: 0

摘要

目的:遗传性甲状腺转蛋白淀粉样变性(ATTRv)是一种罕见的、致命的常染色体显性遗传病,发现有140多种突变。淀粉样蛋白浸润的三种表型是神经病(ATTRv-PN)、心脏病(ATTRv-CM)和神经病+心脏病(ATTRv-MIX)。缺乏atr特异性生物标志物,活检证据困难,已知的致病机制有限,使得诊断困难。新出现的监测进展和疾病改善治疗的无创措施改善了早期诊断和患者管理。方法:本研究采用最新的基于数据独立获取的定量蛋白质组学(DIA)技术,揭示中国遗传性甲状腺转蛋白淀粉样变性(ATTRv)患者的全面血浆蛋白谱。我们分析了三种表型(ATTRv-PN、ATTRv-CM和ATTRv-MIX)的差异表达蛋白(DEPs)。结果:共收集了18例患者(6例ATTRv-PN患者,5例ATTRv-CM患者,7例ATTRv-MIX患者)的血清样本,20例健康参与者作为对照组。结合蛋白组学和生物信息学分析结果,我们发现ATTRv-PN与对照之间聚集在KRT家族蛋白和DSC3中30个DEPs和蛋白相互作用网络,这些网络富含雌激素信号通路和细胞粘附分子(CAM)通路。结论:本研究显示了atv不同阶段的全局和显著的蛋白质组学特征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Data-independent acquisition mass spectrometry reveals comprehensive plasma protein profiles in the natural history of patients with hereditary transthyretin amyloidosis (ATTRv).

Objectives: Hereditary transthyretin amyloidosis (ATTRv) is a rare, fatal, autosomal dominant disease with more than 140 mutations discovered. Three phenotypes of amyloid infiltration are neuropathy (ATTRv-PN), cardiopathy (ATTRv-CM), and neuropathy + cardiopathy (ATTRv-MIX). The lack of ATTR-specific biomarkers, difficulties in biopsy evidence, and limited known pathogenic mechanisms have made diagnosis difficult. Newly emerging noninvasive measures for monitoring progression and disease-modifying therapies have improved early diagnosis and patient management.

Methods: Our research applies the latest technology, Data-Independent Acquisition-Based Quantitative Proteomics (DIA), to reveal comprehensive plasma protein profiles in the natural history of Chinese patients with hereditary transthyretin amyloidosis (ATTRv). We analyzed differentially expressed proteins (DEPs) in three phenotypes (ATTRv-PN, ATTRv-CM, and ATTRv-MIX).

Results: Serum samples were collected from a total of 18 patients (6 ATTRv-PN, 5 ATTRv-CM, and 7 ATTRv-MIX patients) and 20 healthy participants as a control group. Combined with the results of the proteomic and bioinformatic analyses, we found 30 DEPs and protein interaction networks clustered in KRT family proteins and DSC3 between ATTRv-PN and the control, which were rich in the estrogen signaling pathway and the cell adhesion molecule (CAM) pathway.

Conclusion: This study demonstrates a global and significant proteomic profile in different stages of ATTRv.

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来源期刊
Expert Review of Proteomics
Expert Review of Proteomics 生物-生化研究方法
CiteScore
7.60
自引率
0.00%
发文量
20
审稿时长
6-12 weeks
期刊介绍: Expert Review of Proteomics (ISSN 1478-9450) seeks to collect together technologies, methods and discoveries from the field of proteomics to advance scientific understanding of the many varied roles protein expression plays in human health and disease. The journal coverage includes, but is not limited to, overviews of specific technological advances in the development of protein arrays, interaction maps, data archives and biological assays, performance of new technologies and prospects for future drug discovery. The journal adopts the unique Expert Review article format, offering a complete overview of current thinking in a key technology area, research or clinical practice, augmented by the following sections: Expert Opinion - a personal view on the most effective or promising strategies and a clear perspective of future prospects within a realistic timescale Article highlights - an executive summary cutting to the author''s most critical points.
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