交通相关空气污染和补充叶酸摄入量与颗粒细胞 DNA 甲基化的关系。

IF 5.7 2区 医学 Q1 Medicine
Audrey J Gaskins, Robert B Hood, Jennifer B Ford, Russ Hauser, Anna K Knight, Alicia K Smith, Todd M Everson
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引用次数: 0

摘要

背景:较高的交通相关空气污染(TRAP)暴露与较低的生育能力有关,对卵巢有特定的不利影响。叶酸可减轻这些影响。我们的目的是探讨TRAP暴露和叶酸补充摄入量与粒细胞(GC)表观遗传老化和CpG特异性DNA甲基化(DNAm)的关系。我们的研究纳入了 61 名在生殖中心接受卵巢刺激的女性(2005-2015 年)。使用 Infinium MethylationEPIC BeadChip 分析了颗粒细胞中的 DNAm 水平。使用时空模型估算了基于居住地的二氧化氮(NO2)暴露,从而确定了TRAP。补充叶酸的摄入量通过有效的食物频率问卷进行测量。我们使用线性回归法评估了二氧化氮或补充叶酸是否与泛组织、壁面 GC 和 GrimAge 时钟或整个基因组的 DNAm 的表观遗传年龄加速有关,并对潜在的混杂因素进行了调整,同时考虑了假发现率的多重测试 结果:二氧化氮或补充叶酸的摄入与 GC 的表观遗传年龄加速之间没有关联。二氧化氮和补充叶酸分别与 9 个和 11 个不同的甲基化 CpG 位点有关。在这些 CpGs 中,只有 cg07287107 显示出显著的交互作用(p 值 = 0.037)。在补充叶酸较少的妇女中,高浓度的二氧化氮暴露与 DNAm 高出 1.7% 有关。在补充叶酸较多的妇女中,二氧化氮与 DNAm 之间没有关联。注释到与 NO2 相关的前 250 个 CpGs 的基因富含碳水化合物和蛋白质代谢、突触后电位和树突发育以及膜成分和外吞。与补充叶酸相关的前250个CpGs注释的基因富集于发情周期、学习、认知、突触组织和传递以及神经元细胞体的大小和组成:我们没有发现 NO2、补充叶酸和 DNAm 年龄加速 GC 之间的关联。然而,有20个不同的甲基化CpGs和多个富集的GO术语与这两种暴露相关,这表明GC DNAm的差异可能是TRAP和补充叶酸对卵巢功能影响的一个合理机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Traffic-related air pollution and supplemental folic acid intake in relation to DNA methylation in granulosa cells.

Traffic-related air pollution and supplemental folic acid intake in relation to DNA methylation in granulosa cells.

Traffic-related air pollution and supplemental folic acid intake in relation to DNA methylation in granulosa cells.

Traffic-related air pollution and supplemental folic acid intake in relation to DNA methylation in granulosa cells.

Background: Higher exposure to traffic-related air pollution (TRAP) is related to lower fertility, with specific adverse effects on the ovary. Folic acid may attenuate these effects. Our goal was to explore the relation of TRAP exposure and supplemental folic acid intake with epigenetic aging and CpG-specific DNA methylation (DNAm) in granulosa cells (GC). Our study included 61 women undergoing ovarian stimulation at a fertility center (2005-2015). DNAm levels were profiled in GC using the Infinium MethylationEPIC BeadChip. TRAP was defined using a spatiotemporal model to estimate residence-based nitrogen dioxide (NO2) exposure. Supplemental folic acid intake was measured with a validated food frequency questionnaire. We used linear regression to evaluate whether NO2 or supplemental folic acid was associated with epigenetic age acceleration according to the Pan-tissue, mural GC, and GrimAge clocks or DNAm across the genome adjusting for potential confounders and accounting for multiple testing with a false discovery rate < 0.1.

Results: There were no associations between NO2 or supplemental folic acid intake and epigenetic age acceleration of GC. NO2 and supplemental folic acid were associated with 9 and 11 differentially methylated CpG sites. Among these CpGs, only cg07287107 exhibited a significant interaction (p-value = 0.037). In women with low supplemental folic acid, high NO2 exposure was associated with 1.7% higher DNAm. There was no association between NO2 and DNAm in women with high supplemental folic acid. The genes annotated to the top 250 NO2-associated CpGs were enriched for carbohydrate and protein metabolism, postsynaptic potential and dendrite development, and membrane components and exocytosis. The genes annotated to the top 250 supplemental folic acid-associated CpGs were enriched for estrous cycle, learning, cognition, synaptic organization and transmission, and size and composition of neuronal cell bodies.

Conclusions: We found no associations between NO2, supplemental folic acid, and DNAm age acceleration of GC. However, there were 20 differentially methylated CpGs and multiple enriched GO terms associated with both exposures suggesting that differences in GC DNAm could be a plausible mechanism underlying the effects of TRAP and supplemental folic acid on ovarian function.

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来源期刊
Clinical Epigenetics
Clinical Epigenetics Biochemistry, Genetics and Molecular Biology-Developmental Biology
CiteScore
8.90
自引率
5.30%
发文量
150
审稿时长
12 weeks
期刊介绍: Clinical Epigenetics, the official journal of the Clinical Epigenetics Society, is an open access, peer-reviewed journal that encompasses all aspects of epigenetic principles and mechanisms in relation to human disease, diagnosis and therapy. Clinical trials and research in disease model organisms are particularly welcome.
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