Ngon T Truong, Gieo H Phan, Tran T H Lam, Ton H D Nguyen, Do T Khang, Men T Tran, Nam S Tran, Quang M Dinh
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Hence, the present study aimed to describe the morphological variations of the morphologically identified gobies and to validate them at the molecular level through the sequencing of the barcode region, the mitochondrial cytochrome C oxidase subunit I (COI) gene to preliminary provide fundamental information for conservation.</p><p><strong>Results: </strong>The mitochondrial cytochrome C oxidase subunit I genes were amplified successfully with an approximate size of 650-680 bp. Their morphometries were quite different, and the genetic distance (p-value) among groups and within groups ranged from 0.00 to 0.12. The similarity of the COI gene sequences between the analyzed samples and in the NCBI database was from 87.01 to 100%. The specimens of G. aureus, G. giuris and G. sparsipapillus were interspersed in small branches of the phylogenetic tree with a low genetic distance highlighting that the genetic diversity of COI gene was low among species. Therefore, it is recommended that a combination of morphological method and mtCOI DNA barcoding is required for accurate classification.</p><p><strong>Conclusion: </strong>This study helps determine three distinct lineages of Glossogobius species, so an appropriate strategy can be proposed for exploitation and conservation.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2022-06-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126994/pdf/","citationCount":"0","resultStr":"{\"title\":\"The mismatch between morphological and molecular attribution of three Glossogobius species in the Mekong Delta.\",\"authors\":\"Ngon T Truong, Gieo H Phan, Tran T H Lam, Ton H D Nguyen, Do T Khang, Men T Tran, Nam S Tran, Quang M Dinh\",\"doi\":\"10.1186/s40850-022-00137-6\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>The Vietnamese Mekong Delta (VMD) is the granary for the whole country, providing animal and plant resources, especially fish. 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引用次数: 0
摘要
背景:越南湄公河三角洲(VMD)是全国的粮仓,提供动植物资源,尤其是鱼类资源。在鱼类物种中,Glossogobius 属占大多数。迄今为止,对该物种的研究仅依赖于鱼类形态学进行鉴定。因此,本研究旨在描述经形态鉴定的虾虎鱼的形态变异,并通过线粒体细胞色素 C 氧化酶亚单位 I(COI)基因的条形码测序,在分子水平上对其进行验证,从而为保护虾虎鱼提供初步的基础信息:结果:成功扩增了线粒体细胞色素 C 氧化酶亚基 I 基因,其大小约为 650-680 bp。它们的形态差异很大,组间和组内的遗传距离(P 值)在 0.00 至 0.12 之间。分析样本与 NCBI 数据库中 COI 基因序列的相似度为 87.01%至 100%。金黄色葡萄球菌(G. aureus)、金黄色葡萄球菌(G. giuris)和穗状葡萄球菌(G. sparsipapillus)的标本在系统发生树的小分支中交错分布,遗传距离较小,这表明物种间 COI 基因的遗传多样性较低。因此,建议结合形态学方法和 mtCOI DNA 条形码进行准确分类:本研究有助于确定 Glossogobius 的三个不同品系,从而提出适当的开发和保护策略。
The mismatch between morphological and molecular attribution of three Glossogobius species in the Mekong Delta.
Background: The Vietnamese Mekong Delta (VMD) is the granary for the whole country, providing animal and plant resources, especially fish. Among the fish species, the genus Glossogobius are the majority. Until now, research for this species has been solely relied on fish morphology for identification. Hence, the present study aimed to describe the morphological variations of the morphologically identified gobies and to validate them at the molecular level through the sequencing of the barcode region, the mitochondrial cytochrome C oxidase subunit I (COI) gene to preliminary provide fundamental information for conservation.
Results: The mitochondrial cytochrome C oxidase subunit I genes were amplified successfully with an approximate size of 650-680 bp. Their morphometries were quite different, and the genetic distance (p-value) among groups and within groups ranged from 0.00 to 0.12. The similarity of the COI gene sequences between the analyzed samples and in the NCBI database was from 87.01 to 100%. The specimens of G. aureus, G. giuris and G. sparsipapillus were interspersed in small branches of the phylogenetic tree with a low genetic distance highlighting that the genetic diversity of COI gene was low among species. Therefore, it is recommended that a combination of morphological method and mtCOI DNA barcoding is required for accurate classification.
Conclusion: This study helps determine three distinct lineages of Glossogobius species, so an appropriate strategy can be proposed for exploitation and conservation.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.