Ranjeet Ranjan Jha, S. Pathak, W. Schneider, B. V. R. Kumar, A. Bhavsar, A. Nigam
{"title":"LFANET:利用基于深度学习的跳跃和注意力将3T单壳转换为7T多壳DMRI","authors":"Ranjeet Ranjan Jha, S. Pathak, W. Schneider, B. V. R. Kumar, A. Bhavsar, A. Nigam","doi":"10.1109/ISBI52829.2022.9761658","DOIUrl":null,"url":null,"abstract":"HARDI-based diffusion MRI acquisition technique is a relatively recent modality of interest as it can yield more accurate fiber tracts. Besides, HARDI at higher magnetic strength is more sensitive to tissue changes and accurately estimate anatomical details in the human brain. However, a higher magnetic strength scanner is costly and not available in most clinical settings. Furthermore, due to signal-to-noise ratio issues and severe imaging artefacts, most existing 3T dMRI scanners with low gradient-strengths generally acquire single-shell up to b = 1000s/mm2. Hence, in this work, we consider the task of transforming the 3T single-shell HARDI signal (at b = 1000s/mm2) to a 7T multi-shell HARDI signal utilizing the proposed deep learning model LF ANet. The proposed model consists of modules based on a Leapfrog method and an attention module. In addition, we have included suitable loss functions such as L1 and total variation loss. Several quantitative and qualitative results have been presented to show the effectiveness of the proposed method.","PeriodicalId":6827,"journal":{"name":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","volume":"94 1","pages":"1-5"},"PeriodicalIF":0.0000,"publicationDate":"2022-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"LFANET: Transforming 3T Single-Shell to 7T Multi-Shell DMRI Using Deep Learning Based Leapfrog and Attention\",\"authors\":\"Ranjeet Ranjan Jha, S. Pathak, W. Schneider, B. V. R. Kumar, A. Bhavsar, A. Nigam\",\"doi\":\"10.1109/ISBI52829.2022.9761658\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"HARDI-based diffusion MRI acquisition technique is a relatively recent modality of interest as it can yield more accurate fiber tracts. Besides, HARDI at higher magnetic strength is more sensitive to tissue changes and accurately estimate anatomical details in the human brain. However, a higher magnetic strength scanner is costly and not available in most clinical settings. Furthermore, due to signal-to-noise ratio issues and severe imaging artefacts, most existing 3T dMRI scanners with low gradient-strengths generally acquire single-shell up to b = 1000s/mm2. Hence, in this work, we consider the task of transforming the 3T single-shell HARDI signal (at b = 1000s/mm2) to a 7T multi-shell HARDI signal utilizing the proposed deep learning model LF ANet. The proposed model consists of modules based on a Leapfrog method and an attention module. In addition, we have included suitable loss functions such as L1 and total variation loss. Several quantitative and qualitative results have been presented to show the effectiveness of the proposed method.\",\"PeriodicalId\":6827,\"journal\":{\"name\":\"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)\",\"volume\":\"94 1\",\"pages\":\"1-5\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-03-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/ISBI52829.2022.9761658\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ISBI52829.2022.9761658","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
LFANET: Transforming 3T Single-Shell to 7T Multi-Shell DMRI Using Deep Learning Based Leapfrog and Attention
HARDI-based diffusion MRI acquisition technique is a relatively recent modality of interest as it can yield more accurate fiber tracts. Besides, HARDI at higher magnetic strength is more sensitive to tissue changes and accurately estimate anatomical details in the human brain. However, a higher magnetic strength scanner is costly and not available in most clinical settings. Furthermore, due to signal-to-noise ratio issues and severe imaging artefacts, most existing 3T dMRI scanners with low gradient-strengths generally acquire single-shell up to b = 1000s/mm2. Hence, in this work, we consider the task of transforming the 3T single-shell HARDI signal (at b = 1000s/mm2) to a 7T multi-shell HARDI signal utilizing the proposed deep learning model LF ANet. The proposed model consists of modules based on a Leapfrog method and an attention module. In addition, we have included suitable loss functions such as L1 and total variation loss. Several quantitative and qualitative results have been presented to show the effectiveness of the proposed method.