甘蔗成熟期GR2和GL05136转录组比较分析

Luo Yefei, Ou Kewei, L. Qing, Yu Zhang, C. Qin, Zhu Pengjin, Zhou Quanguang, Pang Xinhua, P. Lv
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引用次数: 0

摘要

甘蔗‘GR2’和‘GL05136’属于晚、早熟高糖品种。对两个品种的叶和茎混合样品进行转录组测序,比较基因表达差异,筛选和克隆可能参与糖合成的基因。采用同期种间和不同时期种内两种比较方法,在两个品种中设置4个对照组。使用KEGG和GO数据库分析糖合成相关领域的总体转录组和基因差异表达。结果表明,该植物中存在5种糖合成相关酶的97个基因序列和几个功能未知的高表达基因。随后,可以通过构建转基因甘蔗验证体系、完善糖代谢分子机制理论、开发高糖分子标记甚至构建高表达转基因品种来验证高表达基因的功能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comparative Transcriptome Analysis of GR2 and GL05136 in Mature-stage of Sugarcane
Sugarcane 'GR2' and 'GL05136' belong to late and early maturing high sugar varieties. Transcriptome sequencing was performed on the mixed samples of the leaves and stems of the two varieties to compare the differences in gene expression and to screen and clone genes that may be involved in sugar synthesis. Two comparison methods of interspecific at the same period and intraspecific at different periods were adopted, and four comparison groups were set up in the two varieties. KEGG and GO databases were used to analyze the overall transcriptome and the gene differential expression in the related fields of sugar synthesis. The results showed that there were 97 gene sequences of 5 enzymes related to sugar synthesis and several high-expression genes whose functions were unknown. Subsequently, the function of the high-expression genes could be verified by building a transgenic sugarcane validation system, improving the molecular mechanism theory of sugar metabolism, developing high-sugar molecular markers and even building high-expression transgenic varieties.
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