以16S rRNA基因为靶点的哺乳动物法医物种鉴定

Yukinobu Kutsuwada
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引用次数: 0

摘要

在犯罪现场经常发现来自人类和各种未知生物的生物证据。在某些情况下,物种鉴定对调查很重要。因此,研究了一种针对16s rRNA基因三个区域的直接测序方法,对14个哺乳动物样本进行了分类。对每个哺乳动物DNA样本,用改良的通用引物凝胶电泳分析PCR产物。使用BigDye Terminator v1.1循环测序试剂盒和ABI 3130xl遗传分析仪进行直接测序。每个序列通过核苷酸BLAST同源性搜索进行评估。每个样本的序列同源性的顶部命中匹配实际物种,或密切相关的物种。总之,该eŠective方法可用于常规法医实践,以鉴定未知哺乳动物生物样本的种类,如血液、体液、组织、毛发和骨骼。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Forensic species identification of mammals targeting the 16S rRNA gene by direct sequencing
Biological evidence is often found at crime scenes that are from human and various unknown organisms. In some cases, species identiˆcation is important for an investigation. Therefore, a direct sequencing method that targets three regions of the 16s rRNA gene was examined to classify 14 mammalian samples. For each mammalian DNA sample, PCR products were analyzed by gel electrophoresis with modiˆed universal primers. Direct sequencing was performed using a BigDye Terminator v1.1 Cycle Sequencing kit and an ABI 3130xl Genetic Analyzer. Each sequence was evaluated by a nucleotide BLAST homology search. The top hits for sequence homology for each sample matched the actual species, or closely-related species. In conclusion, this eŠective method may be used in routine forensic practices to identify the species of unknown mammalian biological samples, such as from blood, body ‰uid, tissue, hair, and bone.
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