植物DNA条形码标准技术说明摘要

L. Gao, Jie Liu, Jie Cai, Jun-bo Yang, Ting Zhang, De‐Zhu Li
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引用次数: 10

摘要

DNA条形码是一种利用不同基因组的一个或几个标准化DNA区域进行物种快速鉴定的技术,广泛应用于生物分类、生态调查和生物多样性评价等领域。由于植物的天然特殊性和植物DNA条形码与动物的不同,最初为动物设计的BOLD提供的标准在植物DNA条形码研究中并不完全兼容。因此,我们参考BOLD标准和植物DNA条形码项目的经验,为国内对植物DNA条形码特别感兴趣的研究人员,综合并定制了一份技术说明和标准概要。介绍了与植物DNA条形码相关的十个方面:1)植物DNA条形码研究的取样策略,2)凭证和相关信息的收集标准,3)标本参考图像的收集标准,4)DNA材料的收集标准,5)DNA材料的干燥和保存标准,6)提取总基因组DNA的质量控制和保存程序,7)推荐的植物条形码和通用引物,8)PCR扩增和测序程序9) DNA条形码文件的命名、编辑和提交,10)DNA条形码数据分析的程序和方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Synopsis of Technical Notes on the Standards for Plant DNA Barcoding
DNA barcoding is a technique using one or a few standardized DNA regions from different genomes for rapid species identification,which is used in the field of taxonomy,ecological surveys and assessment of biodiversity.Because of the plant natural particularity and the DNA barcodes used for plants differing from animals,the standards provided by BOLD which was initially dssigned for animals are not totally compatible in plants DNA barcoding research.Thus,we synthesize and customize a synopsis of technical notes and standards with reference of the BOLD criteria and experience of plant DNA barcoding projects,especial for the researchers with particular interest in plants DNA barcoding in China.Ten aspects related to plants DNA barcoding are covered:1) sampling strategy for a plant DNA barcoding study,2) collecting standards for vouches and associate information,3) collection standards for specimen-referenced images,4) collecting standards for DNA material,5) standards for drying and preserving DNA material,6) quality control and preservation procedures for extracted total genomic DNA,7) recommended plant barcodes and universal primers,8) procedures for PCR amplification and sequencing of the DNA barcodes,9) naming,editing and submission for DNA barcoding files,and 10) procedures and methods for the analysis of DNA barcoding data.
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