{"title":"基于多名医生注释的医学图像分割正态分布新方法。","authors":"Zicong Zhou, Guojun Liao","doi":"10.1117/12.2611973","DOIUrl":null,"url":null,"abstract":"<p><p>Medical image segmentation annotated by experts provides the labeled data sets for many scientific researches. However, due to the unevenly experienced backgrounds of the experts and limited numbers of patients with certain diseases or illnesses, not only do such labeled data sets have smaller samples but their quality and normality also can range in wide variabilities and be ambiguous. In practice, these segmentations are usually assigned to be the ground truths for the scientific studies, so it may undermine the trustworthiness of the resulting findings. Therefore, it is meaningful to consider how to give a more unified opinion of the annotations among different experts. In this paper, a novel approach to form normal distributions of segmentation is proposed based on multiple doctors' annotations for the same patient. The proposed approach is developed through the following steps: (1) utilize a framework<sup>7</sup> of averaging images to construct an averaged annotation based on different given annotations; (2) determine the image registration deformations from the averaged annotation to the given annotations; (3) build a joint multivariate Gaussian distribution over the logorithm of Jacobian determinants and curls of the registration deformations; lastly, (4) simulate a normal distribution of segmentation by the joint Gaussian distribution of registration deformation. This work translates the problem of forming a normal distribution of the image segmentation into a problem of forming joint Gaussian distribution of image registration deformations, which the latter can be reasoned by Jacobian determinant (models local size of pixel cells) and curl (models local rotation of pixel cells) information. In the following sections, a detailed walk-through of the proposed approach is provided along with its analytical mathematics and numerical examples for its effectiveness. A synthetic example of 3 manually defined label image is made to show how to construct a mean label image, and an example of a real cancer image annotated by 3 doctors demonstrates the formation of the normal distribution and the effectiveness of the propose method.</p>","PeriodicalId":54162,"journal":{"name":"Avances en Psicologia Latinoamericana","volume":"33 1","pages":""},"PeriodicalIF":0.4000,"publicationDate":"2022-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9170337/pdf/","citationCount":"0","resultStr":"{\"title\":\"A novel approach to form Normal Distribution of Medical Image Segmentation based on multiple doctors' annotations.\",\"authors\":\"Zicong Zhou, Guojun Liao\",\"doi\":\"10.1117/12.2611973\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Medical image segmentation annotated by experts provides the labeled data sets for many scientific researches. However, due to the unevenly experienced backgrounds of the experts and limited numbers of patients with certain diseases or illnesses, not only do such labeled data sets have smaller samples but their quality and normality also can range in wide variabilities and be ambiguous. In practice, these segmentations are usually assigned to be the ground truths for the scientific studies, so it may undermine the trustworthiness of the resulting findings. Therefore, it is meaningful to consider how to give a more unified opinion of the annotations among different experts. In this paper, a novel approach to form normal distributions of segmentation is proposed based on multiple doctors' annotations for the same patient. The proposed approach is developed through the following steps: (1) utilize a framework<sup>7</sup> of averaging images to construct an averaged annotation based on different given annotations; (2) determine the image registration deformations from the averaged annotation to the given annotations; (3) build a joint multivariate Gaussian distribution over the logorithm of Jacobian determinants and curls of the registration deformations; lastly, (4) simulate a normal distribution of segmentation by the joint Gaussian distribution of registration deformation. This work translates the problem of forming a normal distribution of the image segmentation into a problem of forming joint Gaussian distribution of image registration deformations, which the latter can be reasoned by Jacobian determinant (models local size of pixel cells) and curl (models local rotation of pixel cells) information. In the following sections, a detailed walk-through of the proposed approach is provided along with its analytical mathematics and numerical examples for its effectiveness. A synthetic example of 3 manually defined label image is made to show how to construct a mean label image, and an example of a real cancer image annotated by 3 doctors demonstrates the formation of the normal distribution and the effectiveness of the propose method.</p>\",\"PeriodicalId\":54162,\"journal\":{\"name\":\"Avances en Psicologia Latinoamericana\",\"volume\":\"33 1\",\"pages\":\"\"},\"PeriodicalIF\":0.4000,\"publicationDate\":\"2022-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9170337/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Avances en Psicologia Latinoamericana\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1117/12.2611973\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2022/4/4 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q4\",\"JCRName\":\"PSYCHOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Avances en Psicologia Latinoamericana","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1117/12.2611973","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/4/4 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"PSYCHOLOGY","Score":null,"Total":0}
A novel approach to form Normal Distribution of Medical Image Segmentation based on multiple doctors' annotations.
Medical image segmentation annotated by experts provides the labeled data sets for many scientific researches. However, due to the unevenly experienced backgrounds of the experts and limited numbers of patients with certain diseases or illnesses, not only do such labeled data sets have smaller samples but their quality and normality also can range in wide variabilities and be ambiguous. In practice, these segmentations are usually assigned to be the ground truths for the scientific studies, so it may undermine the trustworthiness of the resulting findings. Therefore, it is meaningful to consider how to give a more unified opinion of the annotations among different experts. In this paper, a novel approach to form normal distributions of segmentation is proposed based on multiple doctors' annotations for the same patient. The proposed approach is developed through the following steps: (1) utilize a framework7 of averaging images to construct an averaged annotation based on different given annotations; (2) determine the image registration deformations from the averaged annotation to the given annotations; (3) build a joint multivariate Gaussian distribution over the logorithm of Jacobian determinants and curls of the registration deformations; lastly, (4) simulate a normal distribution of segmentation by the joint Gaussian distribution of registration deformation. This work translates the problem of forming a normal distribution of the image segmentation into a problem of forming joint Gaussian distribution of image registration deformations, which the latter can be reasoned by Jacobian determinant (models local size of pixel cells) and curl (models local rotation of pixel cells) information. In the following sections, a detailed walk-through of the proposed approach is provided along with its analytical mathematics and numerical examples for its effectiveness. A synthetic example of 3 manually defined label image is made to show how to construct a mean label image, and an example of a real cancer image annotated by 3 doctors demonstrates the formation of the normal distribution and the effectiveness of the propose method.
期刊介绍:
La revista Avances en Psicología Latinoamericana es una revista con evaluación por pares, que publica artículos de carácter integrador en todas las áreas de la psicología. Incluye contribuciones empíricas, teóricas originales y revisiones en profundidad. Los artículos se publican en español, portugués, inglés e italiano con resumen y palabras clave (obtenidas del Thesaurus de la American Psychological Association) en español e inglés. Los artículos enviados deben seguir las normas del Manual de Estilo de Publicaciones de la American Psychological Association (quinta edición, 2001) en lo que respecta a su presentación formal.