{"title":"获得桦树花粉主要变应原betv1基因的核苷酸序列表达载体","authors":"O. Y. Parkhomchuk, E. Fomina, E. E. Grigorieva","doi":"10.29235/1029-8940-2023-68-2-104-113","DOIUrl":null,"url":null,"abstract":"An expression vector containing the gene encoding the most common isoform Bet v 1.0101 of the Bet v 1 protein, the major birch pollen allergen, was created for a subsequent expression in the prokaryotic system of Escherichia coli. Total RNA from birch pollen collected in Belarus was used as a matrix. The expression vector pJC40-Веt v 1 was obtained using molecular-genetic methods: cloning, ligation, transformation. The specificity of the cloned fragment was confirmed by sequencing. During the study, 14 rare Escherichia coli codons were identified in the coding part of the cloned gene. The triplets were evenly arranged in the nucleotide sequence; codon clustering was observed only in two cases. The total percentage of rare triplets (8.75 %) and the calculated value of the codon adaptation level (0.57) allow us to predict a sufficiently efficient expression of the studied gene. The data obtained will be used in the synthesis of the recombinant polypeptide Bet v 1.0101.","PeriodicalId":20656,"journal":{"name":"Proceedings of the National Academy of Sciences of Belarus, Biological Series","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2023-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Obtaining an expression vector containing the nucleotide sequence of the gene encoding Bet v 1 – the major allergen of birch pollen\",\"authors\":\"O. Y. Parkhomchuk, E. Fomina, E. E. Grigorieva\",\"doi\":\"10.29235/1029-8940-2023-68-2-104-113\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"An expression vector containing the gene encoding the most common isoform Bet v 1.0101 of the Bet v 1 protein, the major birch pollen allergen, was created for a subsequent expression in the prokaryotic system of Escherichia coli. Total RNA from birch pollen collected in Belarus was used as a matrix. The expression vector pJC40-Веt v 1 was obtained using molecular-genetic methods: cloning, ligation, transformation. The specificity of the cloned fragment was confirmed by sequencing. During the study, 14 rare Escherichia coli codons were identified in the coding part of the cloned gene. The triplets were evenly arranged in the nucleotide sequence; codon clustering was observed only in two cases. The total percentage of rare triplets (8.75 %) and the calculated value of the codon adaptation level (0.57) allow us to predict a sufficiently efficient expression of the studied gene. The data obtained will be used in the synthesis of the recombinant polypeptide Bet v 1.0101.\",\"PeriodicalId\":20656,\"journal\":{\"name\":\"Proceedings of the National Academy of Sciences of Belarus, Biological Series\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-05-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the National Academy of Sciences of Belarus, Biological Series\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.29235/1029-8940-2023-68-2-104-113\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the National Academy of Sciences of Belarus, Biological Series","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.29235/1029-8940-2023-68-2-104-113","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
构建了桦树花粉主要过敏原betv1蛋白最常见同种异构体betv 1.0101的表达载体,用于在大肠杆菌原核系统中表达。从白俄罗斯桦树花粉中提取总RNA作为基质。通过克隆、结扎、转化等分子遗传学方法获得表达载体pJC40-Веt v1。克隆片段的特异性经测序证实。在研究过程中,在克隆基因的编码部分鉴定出14个罕见的大肠杆菌密码子。三胞胎在核苷酸序列上排列均匀;密码子聚类仅在两例中观察到。罕见三胞胎的总百分比(8.75%)和密码子适应水平的计算值(0.57)使我们能够预测所研究基因的充分有效表达。所得数据将用于重组多肽Bet v 1.0101的合成。
Obtaining an expression vector containing the nucleotide sequence of the gene encoding Bet v 1 – the major allergen of birch pollen
An expression vector containing the gene encoding the most common isoform Bet v 1.0101 of the Bet v 1 protein, the major birch pollen allergen, was created for a subsequent expression in the prokaryotic system of Escherichia coli. Total RNA from birch pollen collected in Belarus was used as a matrix. The expression vector pJC40-Веt v 1 was obtained using molecular-genetic methods: cloning, ligation, transformation. The specificity of the cloned fragment was confirmed by sequencing. During the study, 14 rare Escherichia coli codons were identified in the coding part of the cloned gene. The triplets were evenly arranged in the nucleotide sequence; codon clustering was observed only in two cases. The total percentage of rare triplets (8.75 %) and the calculated value of the codon adaptation level (0.57) allow us to predict a sufficiently efficient expression of the studied gene. The data obtained will be used in the synthesis of the recombinant polypeptide Bet v 1.0101.