酶数据和代谢信息:BRENDA,生物学,生物化学和医学研究的资源

Ida Schomburg, Oliver Hofmann, Claudia Baensch, Antje Chang, Dietmar Schomburg
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引用次数: 60

摘要

完全测序的基因组数量正在迅速增加,实验正在进行中,以获得不同基因产物的转录和表达的定量信息。随着这方面的进展和结构基因组学项目的启动,缺乏易于获取的蛋白质功能信息变得越来越明显。在这里,我们描述了一个综合性的酶和代谢信息系统BRENDA(布伦瑞克酶数据库),该系统是通过人工提取和评估酶的功能和分子参数从原始文献中创建的,并不断更新,目前包含大约来自。35000篇文献参考,保存了至少20000种不同酶的数据,这些酶来自4330多种不同的生物。3700个ec号码。数据存储库中给出了超过26万种不同的酶/配体关系。布伦达可通过万维网(www.brenda.uni-koeln.de)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Enzyme data and metabolic information: BRENDA, a resource for research in biology, biochemistry, and medicine

The number of fully sequenced genomes available is rapidly increasing, and experiments are underway to get quantitative information of the transcription and expression of the different gene products. As this is progressing and projects on structural genomics are starting, the lack of readily accessible functional information about proteins is becoming more obvious. Here, we describe the comprehensive enzymatic and metabolic information system BRENDA (BRaunschweig ENzyme DAta base) which has been created - and is continuously updated - by manual extraction and evaluation of functional and molecular parameters on enzymes from the primary literature, presently containing parameters from approx. 35 000 literature references, holding data of at least 20 000 different enzymes from more than 4330 different organisms classified in the approx. 3 700 EC-numbers. More than 260 000 different enzyme/ligand relationships are given in the data repository. BRENDA is available via the world wide web (www.brenda.uni-koeln.de).

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