高灵敏度环介导等温扩增检测钩端螺旋体

Hua-Wei Chen, Giulia Weissenberger, Erin H. Atkins, C. Chao, Y. Suputtamongkol, W. Ching
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引用次数: 30

摘要

钩端螺旋体病是由致病性钩端螺旋体感染引起的一种世界性人畜共患病。我们建立了一种环介导的等温扩增(LAMP)方法来检测钩端螺旋体的DNA,并对六组靶向亚表面蛋白lipL32基因的引物进行了检测灵敏度评估。最佳引物组在质粒DNA模板和纯化的钩端螺旋体基因组DNA的每次反应中检测到的lipL32拷贝均小于25个。通过将靶向lipL32的引物与先前发表的靶向lipL41的引物组合,该方法的灵敏度提高到12份疑问乳杆菌。LAMP检测的特异性通过使用其他临床遇到的细菌物种的基因组DNA进行评估,如恙虫病东方体、伤寒立克次体、康氏立克次体、立克次体、伯纳氏柯谢氏体和巴通体杆菌。这些基因组DNA样本在我们的LAMP检测中均为阴性。LAMP检测的灵敏度与实时荧光定量PCR非常相似。对LAMP扩增产物进行了几种检测方法,以证明该方法的简单性。总之,我们的结果表明,这种检测方法快速、可靠、易于执行,具有在流行地区使用的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Highly Sensitive Loop-Mediated Isothermal Amplification for the Detection of Leptospira
Leptospirosis is a worldwide zoonosis caused by an infection with the pathogenic species of Leptospira. We have developed a loop-mediated isothermal amplification (LAMP) assay to detect the DNA of Leptospira spp. Six sets of primers targeting the gene of the subsurface protein, lipL32, were evaluated for their detection sensitivity. The best primer set detected less than 25 copies of lipL32 per reaction of both plasmid DNA template and purified leptospiral genomic DNA. By combining primers targeting lipL32 with the previously published primer set targeting lipL41, the sensitivity of the assay was improved to 12 copies of L. interrogans. The specificity of the LAMP assay was evaluated by using the genomic DNA from other clinically encountered bacterial species such as different strains of Orientia tsutsugamushi, Rickettsia typhi, Rickettsia conorii, Rickettsia rickettsii, Coxiella burnetii, and Bartonella bacilliformis. These genomic DNA samples were all negative in our LAMP assay. The sensitivity of the LAMP assay was very similar to that of quantitative real time PCR. Several detection methods for the amplified product of LAMP assay were performed to demonstrate the simplicity of the assay. In summary, our results have suggested that this assay is rapid, robust, and easy to perform and has the potential to be used in endemic locations.
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