基于磁共振成像的放射组学分析评估肝肺泡包虫病的生物活性:初步研究

Z. Miao, Ren Bo, Yuwei Xia, Wenya Liu
{"title":"基于磁共振成像的放射组学分析评估肝肺泡包虫病的生物活性:初步研究","authors":"Z. Miao, Ren Bo, Yuwei Xia, Wenya Liu","doi":"10.4103/rid.rid_21_22","DOIUrl":null,"url":null,"abstract":"OBJECTIVE: The objective of this study was to develop and evaluate predictive models based on a combination of T2-weighted images (T2WI) and different machine learning algorithms, and to explore the value of hepatic alveolar echinococcosis (HAE) activity assessment by magnetic resonance imaging (MRI) radiomics. MATERIALS AND METHODS: This retrospective study included 136 patients diagnosed with HAE at the First Affiliated Hospital of Xinjiang Medical University between 2012 and 2020. All subjects underwent MRI and positron emission tomography–computed tomography (PET-CT) before surgery. Taking the PET-CT examination results as the reference standard, patients were divided into active (90 cases) and inactive groups (46 cases). The volume of interest of the lesion was manually delineated on T2WI, and quantitative radiomics features were extracted. Synthetic Minority Oversampling Technology was used to balance the number of patients in the categories. To control for redundancy, the least absolute shrinkage and selection operator was used for feature screening after normalization, and ten optimal features were obtained based on correlation coefficient screening. Three machine learning classifiers were trained using five-fold cross-validation and their performance was compared to establish an optimal HAE activity assessment model. The performance of the classifier was evaluated by area under the receiver operating characteristics curve (AUC), sensitivity, specificity, and accuracy (ACC). The ten optimal features selected from each fold were combined using three machine learning algorithms: logistic regression, multilayer perceptron (MLP), and support vector machine, to establish an HAE activity prediction model. RESULTS: The three machine learning classifiers all showed good prediction performance with a mean AUC on the test set of more than 0.80, and the MLP showing the best performance (AUC = 0.830 ± 0.053, ACC = 0.817, sensitivity = 0.822, and specificity = 0.811). CONCLUSION: HAE activity can be accurately evaluated by a radiomics method using a combination of quantitative T2WI features and machine learning.","PeriodicalId":101055,"journal":{"name":"Radiology of Infectious Diseases","volume":"36 1","pages":"37 - 46"},"PeriodicalIF":0.0000,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Magnetic resonance imaging-based radiomics analysis for the assessment of hepatic alveolar echinococcosis biological activity: A preliminary study\",\"authors\":\"Z. Miao, Ren Bo, Yuwei Xia, Wenya Liu\",\"doi\":\"10.4103/rid.rid_21_22\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"OBJECTIVE: The objective of this study was to develop and evaluate predictive models based on a combination of T2-weighted images (T2WI) and different machine learning algorithms, and to explore the value of hepatic alveolar echinococcosis (HAE) activity assessment by magnetic resonance imaging (MRI) radiomics. MATERIALS AND METHODS: This retrospective study included 136 patients diagnosed with HAE at the First Affiliated Hospital of Xinjiang Medical University between 2012 and 2020. All subjects underwent MRI and positron emission tomography–computed tomography (PET-CT) before surgery. Taking the PET-CT examination results as the reference standard, patients were divided into active (90 cases) and inactive groups (46 cases). The volume of interest of the lesion was manually delineated on T2WI, and quantitative radiomics features were extracted. Synthetic Minority Oversampling Technology was used to balance the number of patients in the categories. To control for redundancy, the least absolute shrinkage and selection operator was used for feature screening after normalization, and ten optimal features were obtained based on correlation coefficient screening. Three machine learning classifiers were trained using five-fold cross-validation and their performance was compared to establish an optimal HAE activity assessment model. The performance of the classifier was evaluated by area under the receiver operating characteristics curve (AUC), sensitivity, specificity, and accuracy (ACC). The ten optimal features selected from each fold were combined using three machine learning algorithms: logistic regression, multilayer perceptron (MLP), and support vector machine, to establish an HAE activity prediction model. RESULTS: The three machine learning classifiers all showed good prediction performance with a mean AUC on the test set of more than 0.80, and the MLP showing the best performance (AUC = 0.830 ± 0.053, ACC = 0.817, sensitivity = 0.822, and specificity = 0.811). CONCLUSION: HAE activity can be accurately evaluated by a radiomics method using a combination of quantitative T2WI features and machine learning.\",\"PeriodicalId\":101055,\"journal\":{\"name\":\"Radiology of Infectious Diseases\",\"volume\":\"36 1\",\"pages\":\"37 - 46\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Radiology of Infectious Diseases\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.4103/rid.rid_21_22\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Radiology of Infectious Diseases","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4103/rid.rid_21_22","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

目的:本研究的目的是建立和评估基于t2加权图像(T2WI)和不同机器学习算法的预测模型,并探讨磁共振成像(MRI)放射组学对肝肺泡包虫病(HAE)活动性评估的价值。材料与方法:本回顾性研究纳入2012年至2020年在新疆医科大学第一附属医院诊断为HAE的136例患者。所有受试者在手术前接受MRI和正电子发射断层扫描(PET-CT)。以PET-CT检查结果为参考标准,将患者分为活动组(90例)和非活动组(46例)。在T2WI上手动划定病灶的感兴趣体积,并提取定量放射组学特征。使用合成少数过采样技术来平衡类别中的患者数量。为控制冗余,归一化后采用最小绝对收缩和选择算子进行特征筛选,基于相关系数筛选得到10个最优特征。三种机器学习分类器使用五重交叉验证进行训练,并比较其性能,以建立最佳HAE活动评估模型。通过受试者工作特征曲线下面积(AUC)、灵敏度、特异性和准确性(ACC)对分类器的性能进行评价。利用三种机器学习算法:逻辑回归、多层感知器(MLP)和支持向量机,将从每个折叠中选出的10个最优特征组合在一起,建立HAE活动预测模型。结果:3种机器学习分类器均表现出较好的预测性能,在测试集上的平均AUC均大于0.80,其中MLP表现最好(AUC = 0.830±0.053,ACC = 0.817,灵敏度= 0.822,特异性= 0.811)。结论:利用定量T2WI特征和机器学习相结合的放射组学方法可以准确评估HAE的活动性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Magnetic resonance imaging-based radiomics analysis for the assessment of hepatic alveolar echinococcosis biological activity: A preliminary study
OBJECTIVE: The objective of this study was to develop and evaluate predictive models based on a combination of T2-weighted images (T2WI) and different machine learning algorithms, and to explore the value of hepatic alveolar echinococcosis (HAE) activity assessment by magnetic resonance imaging (MRI) radiomics. MATERIALS AND METHODS: This retrospective study included 136 patients diagnosed with HAE at the First Affiliated Hospital of Xinjiang Medical University between 2012 and 2020. All subjects underwent MRI and positron emission tomography–computed tomography (PET-CT) before surgery. Taking the PET-CT examination results as the reference standard, patients were divided into active (90 cases) and inactive groups (46 cases). The volume of interest of the lesion was manually delineated on T2WI, and quantitative radiomics features were extracted. Synthetic Minority Oversampling Technology was used to balance the number of patients in the categories. To control for redundancy, the least absolute shrinkage and selection operator was used for feature screening after normalization, and ten optimal features were obtained based on correlation coefficient screening. Three machine learning classifiers were trained using five-fold cross-validation and their performance was compared to establish an optimal HAE activity assessment model. The performance of the classifier was evaluated by area under the receiver operating characteristics curve (AUC), sensitivity, specificity, and accuracy (ACC). The ten optimal features selected from each fold were combined using three machine learning algorithms: logistic regression, multilayer perceptron (MLP), and support vector machine, to establish an HAE activity prediction model. RESULTS: The three machine learning classifiers all showed good prediction performance with a mean AUC on the test set of more than 0.80, and the MLP showing the best performance (AUC = 0.830 ± 0.053, ACC = 0.817, sensitivity = 0.822, and specificity = 0.811). CONCLUSION: HAE activity can be accurately evaluated by a radiomics method using a combination of quantitative T2WI features and machine learning.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信