E. Akbariazar, A. Angaji, P. Pakzad, Isa Abdi Rad, Arash Musarrezaii Aghdam
{"title":"伊朗阿塞拜疆人群中维生素d反应因子基因易感变异与复发缓解型多发性硬化症风险的相关性研究","authors":"E. Akbariazar, A. Angaji, P. Pakzad, Isa Abdi Rad, Arash Musarrezaii Aghdam","doi":"10.52547/umj.33.2.88","DOIUrl":null,"url":null,"abstract":"Background & Aims: Multiple sclerosis (MS) (MIM #126200) is a chronic, inflammatory, demyelinating disorder of the central nervous system (CNS) that is the most common reason for non-traumatic neurological defects among young people. The aim of this study was to evaluate the association between single-nucleotide polymorphisms (SNPs) in genes with vitamin D response elements (VDREs) in their regulatory regions and the risk of relapsing-remitting multiple sclerosis (RR-MS) in the Iranian Azeri population. Materials & Methods : A total of 129RR-MS cases and 200 normal controls from West Azerbaijan were recruited in this study. We genotyped the fourteen MS susceptible variants in genes with vitamin D response elements that emerged from previous genome-wide association studies (GWAS), using Tetra-primer amplification refractory mutation system PCR (T-ARMS-PCR) assay in every participant. Chi-square, Fisher's exact test, and allelic and genotypic regression analysis were used to investigate the association of these polymorphisms with RRMS. Results : Three polymorphisms showed significant association (p-value < 0.05) with RR-MS. In particular, rs4410871 of PVT1 (p-value= 0.035, TT vs CC OR[95%CI]= 2.775 (1.253-6.146)), rs212405 of TAGAP (p-value=0.016, AA vs TT OR[95%CI]= 2.463 (1.255-4.835)), and rs7090512 of IL2RA (p-value= 0.008, CC vs TT OR[95%CI]= 2.865 (1.433-5.731) ) were identified as susceptible risk factors in our group. Conclusion : The current study replicated fourteen susceptible variants in genes with vitamin D response elements and the risk of RR-MS in the Iranian Azeri population, which implies the existence of some similarities between the MS genetic structure of the GWAS populations and the studied Iranian Azeri population.","PeriodicalId":21996,"journal":{"name":"Studies in Medical Sciences","volume":"6 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"STUDY OF ASSOCIATION BETWEEN SUSCEPTIBLE VARIANTS IN GENES WITH VITAMIN D RESPONSE ELEMENTS AND THE RISK OF RELAPSING-REMITTING MULTIPLE-SCLEROSIS IN IRANIAN AZERI POPULATION\",\"authors\":\"E. Akbariazar, A. Angaji, P. Pakzad, Isa Abdi Rad, Arash Musarrezaii Aghdam\",\"doi\":\"10.52547/umj.33.2.88\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Background & Aims: Multiple sclerosis (MS) (MIM #126200) is a chronic, inflammatory, demyelinating disorder of the central nervous system (CNS) that is the most common reason for non-traumatic neurological defects among young people. The aim of this study was to evaluate the association between single-nucleotide polymorphisms (SNPs) in genes with vitamin D response elements (VDREs) in their regulatory regions and the risk of relapsing-remitting multiple sclerosis (RR-MS) in the Iranian Azeri population. Materials & Methods : A total of 129RR-MS cases and 200 normal controls from West Azerbaijan were recruited in this study. We genotyped the fourteen MS susceptible variants in genes with vitamin D response elements that emerged from previous genome-wide association studies (GWAS), using Tetra-primer amplification refractory mutation system PCR (T-ARMS-PCR) assay in every participant. Chi-square, Fisher's exact test, and allelic and genotypic regression analysis were used to investigate the association of these polymorphisms with RRMS. Results : Three polymorphisms showed significant association (p-value < 0.05) with RR-MS. In particular, rs4410871 of PVT1 (p-value= 0.035, TT vs CC OR[95%CI]= 2.775 (1.253-6.146)), rs212405 of TAGAP (p-value=0.016, AA vs TT OR[95%CI]= 2.463 (1.255-4.835)), and rs7090512 of IL2RA (p-value= 0.008, CC vs TT OR[95%CI]= 2.865 (1.433-5.731) ) were identified as susceptible risk factors in our group. 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引用次数: 0
摘要
背景与目的:多发性硬化症(MS) (MIM #126200)是一种慢性、炎症性、脱髓鞘性中枢神经系统(CNS)疾病,是年轻人非创伤性神经系统缺陷的最常见原因。本研究的目的是评估伊朗阿塞拜疆人群中具有维生素D反应元件(VDREs)调控区域基因的单核苷酸多态性(snp)与复发-缓解型多发性硬化症(RR-MS)风险之间的关系。材料与方法:本研究从西阿塞拜疆招募了129RR-MS病例和200名正常对照。我们对先前全基因组关联研究(GWAS)中出现的维生素D反应元件基因中的14个MS易感变异进行了基因分型,对每个参与者使用四引物扩增难解突变系统PCR (T-ARMS-PCR)测定。采用卡方检验、Fisher精确检验、等位基因和基因型回归分析来研究这些多态性与RRMS的关系。结果:3个多态性与RR-MS呈显著相关(p值< 0.05)。其中,PVT1基因rs4410871 (p值= 0.035,TT vs CC OR[95%CI]= 2.775(1.253 ~ 6.146))、TAGAP基因rs212405 (p值=0.016,AA vs TT OR[95%CI]= 2.463(1.255 ~ 4.835))、IL2RA基因rs7090512 (p值= 0.008,CC vs TT OR[95%CI]= 2.865(1.433 ~ 5.731))为本组易感危险因素。结论:本研究在伊朗阿塞拜疆人群中复制了14个与维生素D反应因子和RR-MS风险相关的基因易感变异,这表明GWAS人群和所研究的伊朗阿塞拜疆人群的MS遗传结构存在一定的相似性。
STUDY OF ASSOCIATION BETWEEN SUSCEPTIBLE VARIANTS IN GENES WITH VITAMIN D RESPONSE ELEMENTS AND THE RISK OF RELAPSING-REMITTING MULTIPLE-SCLEROSIS IN IRANIAN AZERI POPULATION
Background & Aims: Multiple sclerosis (MS) (MIM #126200) is a chronic, inflammatory, demyelinating disorder of the central nervous system (CNS) that is the most common reason for non-traumatic neurological defects among young people. The aim of this study was to evaluate the association between single-nucleotide polymorphisms (SNPs) in genes with vitamin D response elements (VDREs) in their regulatory regions and the risk of relapsing-remitting multiple sclerosis (RR-MS) in the Iranian Azeri population. Materials & Methods : A total of 129RR-MS cases and 200 normal controls from West Azerbaijan were recruited in this study. We genotyped the fourteen MS susceptible variants in genes with vitamin D response elements that emerged from previous genome-wide association studies (GWAS), using Tetra-primer amplification refractory mutation system PCR (T-ARMS-PCR) assay in every participant. Chi-square, Fisher's exact test, and allelic and genotypic regression analysis were used to investigate the association of these polymorphisms with RRMS. Results : Three polymorphisms showed significant association (p-value < 0.05) with RR-MS. In particular, rs4410871 of PVT1 (p-value= 0.035, TT vs CC OR[95%CI]= 2.775 (1.253-6.146)), rs212405 of TAGAP (p-value=0.016, AA vs TT OR[95%CI]= 2.463 (1.255-4.835)), and rs7090512 of IL2RA (p-value= 0.008, CC vs TT OR[95%CI]= 2.865 (1.433-5.731) ) were identified as susceptible risk factors in our group. Conclusion : The current study replicated fourteen susceptible variants in genes with vitamin D response elements and the risk of RR-MS in the Iranian Azeri population, which implies the existence of some similarities between the MS genetic structure of the GWAS populations and the studied Iranian Azeri population.