蛋清溶菌酶配体反应的皮秒时间尺度溶剂波动和酶调节

Bediha Besar, K. Woods
{"title":"蛋清溶菌酶配体反应的皮秒时间尺度溶剂波动和酶调节","authors":"Bediha Besar, K. Woods","doi":"10.1109/IRMMW-THZ.2011.6105252","DOIUrl":null,"url":null,"abstract":"Experimental THz experiments on hen egg-white lysozyme (HEWL) with and without the ligand NAG3 has revealed that the protein's solvent structure on the picosecond time scale is in integral part of the regulation mechanism of the enzyme. Our investigation into the low frequency dynamics of the protein has uncovered that the counterions in the solvent shell mediate the collective dynamics of both the water and the protein in the system. As a result, we find that the lysozyme fast dynamics is strongly influenced by fast water (H — bonding) dynamics. Both the activity and structure of the water change with addition of the ligand. Perhaps most intriguing is that we find that the long range correlation between distant parts of protein are broken with the addition of the inhibitor; which coincides with the disruption of energy dispersion in the solvent hydrogen bonding network.","PeriodicalId":6353,"journal":{"name":"2011 International Conference on Infrared, Millimeter, and Terahertz Waves","volume":"43 1","pages":"1-1"},"PeriodicalIF":0.0000,"publicationDate":"2011-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Picosecond time scale solvent fluctuations and enzymatic regulation in hen egg white lysozyme ligand reactions\",\"authors\":\"Bediha Besar, K. Woods\",\"doi\":\"10.1109/IRMMW-THZ.2011.6105252\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Experimental THz experiments on hen egg-white lysozyme (HEWL) with and without the ligand NAG3 has revealed that the protein's solvent structure on the picosecond time scale is in integral part of the regulation mechanism of the enzyme. Our investigation into the low frequency dynamics of the protein has uncovered that the counterions in the solvent shell mediate the collective dynamics of both the water and the protein in the system. As a result, we find that the lysozyme fast dynamics is strongly influenced by fast water (H — bonding) dynamics. Both the activity and structure of the water change with addition of the ligand. Perhaps most intriguing is that we find that the long range correlation between distant parts of protein are broken with the addition of the inhibitor; which coincides with the disruption of energy dispersion in the solvent hydrogen bonding network.\",\"PeriodicalId\":6353,\"journal\":{\"name\":\"2011 International Conference on Infrared, Millimeter, and Terahertz Waves\",\"volume\":\"43 1\",\"pages\":\"1-1\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2011-12-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2011 International Conference on Infrared, Millimeter, and Terahertz Waves\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/IRMMW-THZ.2011.6105252\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2011 International Conference on Infrared, Millimeter, and Terahertz Waves","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/IRMMW-THZ.2011.6105252","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

对加和不加配体NAG3的蛋清溶菌酶(HEWL)的实验太赫兹实验表明,皮秒时间尺度上蛋白质的溶剂结构是酶调控机制的重要组成部分。我们对蛋白质低频动力学的研究发现,溶剂壳中的反离子介导了系统中水和蛋白质的集体动力学。结果表明,溶菌酶的快速动力学受到快速水动力学(氢键)的强烈影响。随着配体的加入,水的活性和结构都发生变化。也许最有趣的是,我们发现,随着抑制剂的加入,蛋白质的遥远部分之间的长期相关性被打破了;这与溶剂氢键网络中能量分散的破坏相吻合。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Picosecond time scale solvent fluctuations and enzymatic regulation in hen egg white lysozyme ligand reactions
Experimental THz experiments on hen egg-white lysozyme (HEWL) with and without the ligand NAG3 has revealed that the protein's solvent structure on the picosecond time scale is in integral part of the regulation mechanism of the enzyme. Our investigation into the low frequency dynamics of the protein has uncovered that the counterions in the solvent shell mediate the collective dynamics of both the water and the protein in the system. As a result, we find that the lysozyme fast dynamics is strongly influenced by fast water (H — bonding) dynamics. Both the activity and structure of the water change with addition of the ligand. Perhaps most intriguing is that we find that the long range correlation between distant parts of protein are broken with the addition of the inhibitor; which coincides with the disruption of energy dispersion in the solvent hydrogen bonding network.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信