异异藜素和氧化白藜芦醇化合物对BCL-2和VEGF-2受体的硅预测

R. Mutiah, Muhammad Fawaz Hariz, Yen yen Ari Indrawijaya, Burhan Ma’arif
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引用次数: 2

摘要

异黄酮素和氧化白藜芦醇是据报道具有抗癌活性的化合物。本研究旨在预测异槲皮素和氧化白藜芦醇的细胞毒活性、毒性和理化性质。使用pkCSM在线工具预测物理化学性质参考利平斯基规则五。使用Protox II在线工具预测化合物毒性,使用Molegro Virtual Docker (MVD)预测配体与受体的相互作用。血管内皮生长因子受体-2 (VEGFR-2) (PDB: 2RL5)和B细胞淋巴瘤BCL-2 (PDB: 4AQ3)作为靶肿瘤受体蛋白。计算机预测结果表明,氧化白藜芦醇和异槲皮苷元的LD50预测值分别在500 ~ 2000 mg/kg、1560 mg/kg和1048 mg/kg之间,符合Lipinski规则。对接结果以Rerank Score (RS)描述的束缚能形式表示。RS值越小的化合物活性越高。氧化白藜芦醇在2RL5上的RS: -73.0413和4AQ3上的RS: -87.9985,异甘草素在2RL5上的RS: -68.0282和4AQ3上的RS: -78.5041。氧化白藜芦醇的细胞毒活性也通过活性氨基酸上的氢键(2RL5: cys919, 4AQ3: tyr67)得到证实。从两种化合物的对接结果来看,氧化白藜芦醇对两种靶向癌症受体蛋白的活性都高于异尿酸原素,符合利平斯基五定律,毒性低。关键词:细胞毒性,毒性,异甘油素,氧化白藜芦醇,硅。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In Silico Prediction of Isoliquiritigenin and Oxyresveratrol Compounds to BCL-2 dan VEGF-2 Receptors
Isoliquiritigenin and oxyresveratrol are compounds that have been reported to have anticancer activities. This study aimed to predict cytotoxic activity, toxicity and physicochemical properties of the compounds isoliquiritigenin and oxyresveratrol. Prediction of physicochemical properties referred to Lipinski rules of five using the pkCSM online tool. Prediction of compounds toxicity using Protox II online tool while ligand interaction with receptors using Molegro Virtual Docker (MVD). Vascular Endothelial Growth Factor Receptor-2 (VEGFR-2) (PDB: 2RL5) and B Cell Lymphoma BCL-2 (PDB: 4AQ3) were used as target cancer receptor proteins. In silico predictive results showed that oxyresveratrol and isoliquiritigenin complied with Lipinski rules of five, predictive values of LD50 between 500-2000 mg/kg respectively 1560 mg/kg and 1048 mg/kg. The docking result was in the form of bound energy described by Rerank Score (RS). A compound having a small RS value was predicted to have greater activity. RS of oxyresveratrol on 2RL5: -73.0413 and 4AQ3: -87.9985, while isoliquiritigenin on 2RL5: -68.0282 and 4AQ3: -78.5041. The cytotoxic activity of oxyresveratrol was also shown by hydrogen bonds in active amino acids (2RL5: Cys 919 in 4AQ3: Tyr 67). From docking results of both compounds, oxyreveratrol had greater activity than isoliquiritigenin to both target cancer receptor proteins and complied Lipinski rules of five and have a low toxicity.Keywords: cytotoxicity, toxicity, isoliquiritigenin, oxyresveratrol, in silico.
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