人类和小鼠CVADR基因的推定调控域

Björn Andersson, Richard P. Tomko, Kimberly Edwards, Momina Mirza, Hamid Darban, Delal Öncü, Erik Sonnhammer, Kerstin Sollerbrant, Lennart Philipson
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引用次数: 13

摘要

柯萨奇病毒B组和腺病毒(CVADR)细胞受体基因最近被分离出来。人类和小鼠基因的完整cDNA已被发表,并被证明编码一个46 kDa的膜蛋白,与免疫球蛋白相似。在这项研究中,我们展示了整个人类CVADR基因的序列和小鼠CVADR基因5 '端5kb的序列。人类和小鼠序列的比较揭示了可能参与基因表达调控的四个保守序列元件。此外,利用来自成年小鼠器官的RNA的RT-PCR鉴定了小鼠CVADR基因的三种不同剪接形式。有趣的是,其中一种形式是老鼠心脏所特有的。在人类基因组HCVADR序列中发现了与两种显性交替剪接的小鼠形式相对应的假定外显子,并显示其最有可能是功能性的。然而,在HCVADR外显子中没有发现与小鼠心脏特异性剪接形式同源的剪接受体位点。因此,这种替代c端在人类中的存在是有问题的。因此,这些数据提供了对人类和小鼠CVADR基因的结构和调控的深入了解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Putative regulatory domains in the human and mouse CVADR genes

The gene for the cellular receptor of coxsackievirus group B and adenoviruses (CVADR) has recently been isolated. The complete cDNA of the human and mouse genes has been published and demonstrated to code for a 46 kDa membrane protein that bears similarity to immunoglobulins. In this study, we present the sequence of the entire human CVADR gene and a 5 kb sequence from the 5′-end of the mouse CVADR gene. A comparison of the human and mouse sequences revealed four conserved sequence elements that may be involved in the regulation of gene expression. In addition, three different splice forms of the mouse CVADR gene were identified by RT-PCR of RNA derived from adult mouse organs. Interestingly, one of the forms was unique to mouse heart. Putative alternative exons corresponding to the two dominant alternately spliced mouse forms were identified in the human genomic HCVADR sequence and shown to most likely be functional. However, a splice acceptor site was not found in an HCVADR exon that is homologous to the mouse heart-specific splice form. Therefore, the presence of this alternative C-terminus in humans is in question. The data thus provide an insight into the structure and regulation of the CVADR genes in humans and mice.

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