{"title":"过氧化氢诱导肺炎链球菌D39蛋白表达的比较蛋白质组学分析","authors":"Sungkyoung Lee, Myoung-Ro Lee, S. Bae, M. Kwak","doi":"10.2174/1570164618999210104223526","DOIUrl":null,"url":null,"abstract":"\n\nStreptococcus pneumoniae is a leading cause of human respiratory tract infection. Despite the lack\nof activities of antioxidative enzymes, including cytochromes, hemoproteins, and peroxidases/catalases, traits conferring the\naerotolerant-anaerobic growth of this bacterium are conserved, with high efficacy of antioxidative actions, in an oxygen-rich\nenvironment.\n\n\n\nThrough proteome analysis, this study’s intention was to evaluate differentially expressed proteins and/or gene\nproducts modeled in a highly virulent strain, S. pneumoniae D39, exogenously-treated with millimolar concentrations of\nH2O2.\n\n\n\nFor two-dimensional gel electrophoresis (2-DE) analysis, following one dimensional isoelectric focusing with an\nimmobilized pH gradient of pH 4-7, the most significantly mobilized proteins expressed were separated by SDS-PAGE in\nthe second dimension. With a total of 431 protein spots detected, certain proteins were excised, in-gel trypsin digested, and\nanalyzed by combination with MALDI-TOF and LC-ESI-MS/MS for mass spectrometric peptide mapping and protein\nidentification. Utilizing mass spectrometry analysis of spots excised from 2-DE, the selected protein spots were identified\nwith a variety of databases and MASCOT.\n\n\n\nWith the aid of comparisons to proteome reference maps, the most differentially expressed 38 proteins, those with\napproximately 1.4-fold or more increase and/or decrease or with multiple isoforms exhibiting variable pI values, were\ninduced by treatment of exogenous 2 mM H2O2. The identified proteins were seen to be involved in pneumococcal\npathogenesis and primary metabolism, amongst others.\n\n\n\nThis is the first study to convincingly document proteomic information associated with pathophysiological\nadaptation under the given oxidative conditions, and corresponding potential antioxidative mechanisms, in S. pneumoniae.\n","PeriodicalId":50601,"journal":{"name":"Current Proteomics","volume":"125 1","pages":""},"PeriodicalIF":0.5000,"publicationDate":"2021-01-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Comparative Proteomic Analysis of Hydrogen Peroxide-induced Protein Expression in Streptococcus pneumoniae D39\",\"authors\":\"Sungkyoung Lee, Myoung-Ro Lee, S. Bae, M. Kwak\",\"doi\":\"10.2174/1570164618999210104223526\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n\\nStreptococcus pneumoniae is a leading cause of human respiratory tract infection. Despite the lack\\nof activities of antioxidative enzymes, including cytochromes, hemoproteins, and peroxidases/catalases, traits conferring the\\naerotolerant-anaerobic growth of this bacterium are conserved, with high efficacy of antioxidative actions, in an oxygen-rich\\nenvironment.\\n\\n\\n\\nThrough proteome analysis, this study’s intention was to evaluate differentially expressed proteins and/or gene\\nproducts modeled in a highly virulent strain, S. pneumoniae D39, exogenously-treated with millimolar concentrations of\\nH2O2.\\n\\n\\n\\nFor two-dimensional gel electrophoresis (2-DE) analysis, following one dimensional isoelectric focusing with an\\nimmobilized pH gradient of pH 4-7, the most significantly mobilized proteins expressed were separated by SDS-PAGE in\\nthe second dimension. With a total of 431 protein spots detected, certain proteins were excised, in-gel trypsin digested, and\\nanalyzed by combination with MALDI-TOF and LC-ESI-MS/MS for mass spectrometric peptide mapping and protein\\nidentification. Utilizing mass spectrometry analysis of spots excised from 2-DE, the selected protein spots were identified\\nwith a variety of databases and MASCOT.\\n\\n\\n\\nWith the aid of comparisons to proteome reference maps, the most differentially expressed 38 proteins, those with\\napproximately 1.4-fold or more increase and/or decrease or with multiple isoforms exhibiting variable pI values, were\\ninduced by treatment of exogenous 2 mM H2O2. The identified proteins were seen to be involved in pneumococcal\\npathogenesis and primary metabolism, amongst others.\\n\\n\\n\\nThis is the first study to convincingly document proteomic information associated with pathophysiological\\nadaptation under the given oxidative conditions, and corresponding potential antioxidative mechanisms, in S. pneumoniae.\\n\",\"PeriodicalId\":50601,\"journal\":{\"name\":\"Current Proteomics\",\"volume\":\"125 1\",\"pages\":\"\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2021-01-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Proteomics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.2174/1570164618999210104223526\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Proteomics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.2174/1570164618999210104223526","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Comparative Proteomic Analysis of Hydrogen Peroxide-induced Protein Expression in Streptococcus pneumoniae D39
Streptococcus pneumoniae is a leading cause of human respiratory tract infection. Despite the lack
of activities of antioxidative enzymes, including cytochromes, hemoproteins, and peroxidases/catalases, traits conferring the
aerotolerant-anaerobic growth of this bacterium are conserved, with high efficacy of antioxidative actions, in an oxygen-rich
environment.
Through proteome analysis, this study’s intention was to evaluate differentially expressed proteins and/or gene
products modeled in a highly virulent strain, S. pneumoniae D39, exogenously-treated with millimolar concentrations of
H2O2.
For two-dimensional gel electrophoresis (2-DE) analysis, following one dimensional isoelectric focusing with an
immobilized pH gradient of pH 4-7, the most significantly mobilized proteins expressed were separated by SDS-PAGE in
the second dimension. With a total of 431 protein spots detected, certain proteins were excised, in-gel trypsin digested, and
analyzed by combination with MALDI-TOF and LC-ESI-MS/MS for mass spectrometric peptide mapping and protein
identification. Utilizing mass spectrometry analysis of spots excised from 2-DE, the selected protein spots were identified
with a variety of databases and MASCOT.
With the aid of comparisons to proteome reference maps, the most differentially expressed 38 proteins, those with
approximately 1.4-fold or more increase and/or decrease or with multiple isoforms exhibiting variable pI values, were
induced by treatment of exogenous 2 mM H2O2. The identified proteins were seen to be involved in pneumococcal
pathogenesis and primary metabolism, amongst others.
This is the first study to convincingly document proteomic information associated with pathophysiological
adaptation under the given oxidative conditions, and corresponding potential antioxidative mechanisms, in S. pneumoniae.
Current ProteomicsBIOCHEMICAL RESEARCH METHODS-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.60
自引率
0.00%
发文量
25
审稿时长
>0 weeks
期刊介绍:
Research in the emerging field of proteomics is growing at an extremely rapid rate. The principal aim of Current Proteomics is to publish well-timed in-depth/mini review articles in this fast-expanding area on topics relevant and significant to the development of proteomics. Current Proteomics is an essential journal for everyone involved in proteomics and related fields in both academia and industry.
Current Proteomics publishes in-depth/mini review articles in all aspects of the fast-expanding field of proteomics. All areas of proteomics are covered together with the methodology, software, databases, technological advances and applications of proteomics, including functional proteomics. Diverse technologies covered include but are not limited to:
Protein separation and characterization techniques
2-D gel electrophoresis and image analysis
Techniques for protein expression profiling including mass spectrometry-based methods and algorithms for correlative database searching
Determination of co-translational and post- translational modification of proteins
Protein/peptide microarrays
Biomolecular interaction analysis
Analysis of protein complexes
Yeast two-hybrid projects
Protein-protein interaction (protein interactome) pathways and cell signaling networks
Systems biology
Proteome informatics (bioinformatics)
Knowledge integration and management tools
High-throughput protein structural studies (using mass spectrometry, nuclear magnetic resonance and X-ray crystallography)
High-throughput computational methods for protein 3-D structure as well as function determination
Robotics, nanotechnology, and microfluidics.