生物源性纳米硒外层蛋白质组学研究

RAN Pub Date : 2016-04-01 DOI:10.11159/ICNNFC16.114
A. Bulgarini, D. Cecconi, S. Lampis, G. Vallini
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引用次数: 0

摘要

硒纳米颗粒(SeNPs)的尺寸从50到300 nm不等,具有抗氧化、免疫保护、抗肿瘤、抗菌和抗生物膜等广泛的应用[1]。它们还可以用于生物修复、量子点和生物传感器的生产。SeNPs可以化学合成(ChSeNPs)或生物合成(BioSeNPs)。生物senps可以通过各种微生物、植物提取物或酶制剂获得。与化学合成相比,生物合成具有成本低、没有有毒副产物和节能(即在温和的环境条件下进行)等优点。生物SeNPs还存在一个主要由蛋白质物质组成的外层,这似乎在很大程度上影响了SeNPs在抗菌和抗生物膜作用方面的反应性。实验证明,BioSeNPs的抗菌活性明显高于ChSeNPs。为了更好地理解这种抗菌/抗生物膜功效的可能机制,应该详细表征其外层的性质。事实上,这种表面相关蛋白的描述及其与金属纳米颗粒结合的特异性可能允许对SeNPs的生物合成途径提出新的假设。纳米颗粒相关蛋白可能参与了SeNPs本身的合成和成熟。本研究重点研究了BioSeNPs外层的蛋白质组学特征。为了实现SeNPs的生物生产,我们使用了芽孢杆菌SeITE01,这是一种从硒高富集豆科植物黄芪(Astragalus bisulcatus rizosphere)中分离出来的环境菌株,能够耐受高达25mM的亚硒酸盐[2]。研究的第一步是在亚硒酸盐存在下生长24小时后,通过SDS-PAGE和质谱分析表征与BioSeNPs相关的蛋白质。此外,我们还研究了蛋白质- np键的特异性。由于ChSeNPs在暴露于无细胞蛋白提取物时也可以结合蛋白质,因此目前正在对与BioSeNPs相关的蛋白质和暴露的ChSeNPs进行比较。我们鉴定出了mycoides的biosenps相关蛋白,这些蛋白属于初级代谢和次级代谢,特别是蛋白质和氨基酸代谢。正如预期的那样,研究人员发现了可能参与亚硒酸盐还原为零价SeNPs的还原酶活性蛋白:吡啶-核苷酸二硫化物氧化还原酶、烯酰- acp还原酶(脂肪酸生物合成)和fmn依赖性NADH偶氮还原酶。还发现了一些参与细胞壁代谢的膜转运蛋白和蛋白质,如:青霉素结合蛋白和溶菌酶(分别为肽聚糖合成和降解途径)和ABC转运蛋白。确定了参与多肽合成和氨基酸代谢的几种蛋白质,包括:延伸因子Tu和G、核糖体蛋白、肽酶和蛋白酶;谷氨酸和丙氨酸脱氢酶。其中一些也参与孢子形成过程:伸长因子、三磷酸腺苷酶、甘油醛-3磷酸脱氢酶、烯酰- acp还原酶、抗碲蛋白和偶氮还原酶。实际上,孢子形成机制可能被细菌细胞用来向细胞外输出新生的纳米颗粒。最后,在暴露的ChSeNPs上也发现了一些与BioSeNPs相关的蛋白质。总之,我们确定了最有可能与SeNPs合成或成熟有关的蛋白质,仅围绕BioSeNPs。这项研究为生物senps的有趣应用开辟了道路,特别是作为抗菌剂或药物输送系统。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Proteomic Study of the Outer Layer of Biogenic Selenium Nanoparticles
Extended Abstract Selenium nanoparticles (SeNPs), which range in size from 50 to 300 nm, show broad applications such as antioxidant, immunoprotective, anti-tumor, antimicrobial and antobiofilm activities [1]. They also can be exploited in bioremediation, production of quantum dots and biosensors. SeNPs can be synthesized chemically (ChSeNPs) or biologically (BioSeNPs). BioSeNPs can be obtained by various microorganisms, plant extracts or enzymatic preparations. Biosynthesis offers advantages over chemical synthesis such as minor costs, absence of toxic by products and energy saving (i.e. carried out under mild environmental conditions). BioSeNPs also present an outer layer, mainly consisting of a proteinaceous material, that seems to greatly influence the reactivity of SeNPs in terms of antimicrobial and antibiofilm effects. It has been proved that antimicrobial activity of BioSeNPs is significantly more than ChSeNPs. To better understand possible mechanisms of this antimicrobial/antibiofilm efficacy of BioSeNPs, the nature of their outer layer should be characterized in details. In fact, the description of such surface-associated proteins and specificity of their binding to metal nanoparticles might allow to formulate new hypotheses on the biosynthetic route of SeNPs. Likely, nanoparticle-associated proteins are involved in the synthesis and maturation of SeNPs themselves. This study focuses on the proteomic characterization of BioSeNPs external layer. For biogenic production of SeNPs, we used Bacillus mycoides SeITE01, an environmental strain isolated from the selenium-hyperaccumulator legume Astragalus bisulcatus rizosphere, capable of tolerating up to 25mM selenite [2]. The first step of the research was the characterization of protein associated to BioSeNPs through SDS-PAGE and mass spectrometry after 24 hours growth in the presence of selenite. Moreover, we studied the specificity of the protein-NP bond. Since ChSeNPs can also bind proteins when exposed to a cell free protein extract, a comparison between proteins associated to BioSeNPs and exposed ChSeNPs is currently ongoing. We identified BioSeNPs-associated proteins for B. mycoides, which belong to primary and secondary metabolism, especially protein and amino acid metabolisms. As expected, proteins capable of reductase activity were found which are possibly involved in selenite reduction to zero-valent SeNPs: pyridine-nucleotide disulphide oxidoreductase, enoyl-ACP reductase (fatty acid biosynthesis) and FMN-dependent NADH azoreductase. Some membrane transporter and proteins involved in cell wall metabolism were also found, such as: penicillin-binding protein and lysozyme (peptidoglycan synthesis and degradation pathways, respectively) and ABC transporters. Several proteins involved in polypeptide synthesis and aminoacid metabolism were identified including: elongation factors Tu and G, ribosomal proteins, peptidases and a protease; glutamate and alanine dehydrogenases. Some of these are also involved in the sporulation process: elongation factors, ATPase, glyceraldehyde-3phosphate dehydrogenase, enoyl-ACP reductase, a tellurium resistance protein and azoreductase. Actually, the sporulation mechanism might be used by bacterial cells to export nascent nanoparticles outside the cell. Finally, some of the proteins associated to BioSeNPs were found on exposed ChSeNPs as well. In conclusion, we identified proteins that are most probably dealing with synthesis or maturation of the SeNPs, only surrounding BioSeNPs. This study can open the way to interesting applications for BioSeNPs, especially as an antimicrobial agent or in drug delivery systems.
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