P269时空机器学习分析完整小肠胶囊内窥镜视频用于预测克罗恩病的预后

R. Kellerman, A. Bleiweiss, S. Samuel, O. Barzilay, R. Margalit Yehuda, E. Zimlichman, R. Eliakim, S. Ben-Horin, E. Klang, U. Kopylov
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引用次数: 0

摘要

胶囊内窥镜(CE)是诊断和监测克罗恩病(CD)的主要方式。然而,由于阅读时间长和观察者之间的差异,使用CE来监测CE受到了阻碍。卷积神经网络(CNN)等机器学习(ML)技术能够准确地检测和分级CD患者CE孤立图像上的炎症表现,准确率超过95%。然而,基于ml的完整CE片分析尚未见报道;此外,到目前为止,还没有研究过ML / CE对CD患者疾病结局的预测效用。研究队列包括treatment-naïve在诊断为CD的6个月内进行过CE (SBIII, Medtronic)的CD患者,随访时间最少为6个月。使用RAPID阅读器软件V9.0提取完整的小肠视频(第一十二指肠至第一盲肠图像)。在提取之前,使用Lewis评分(LS)对CE视频进行评分。从电子病历中提取临床、内窥镜和实验室数据。所有患者在随访期间按生物治疗开始时间进行分类。机器学习分析由英特尔公司使用Facebook开发的TimeSformer计算机视觉算法进行。患者队列包括103例患者,其中女性54例(52%),中位年龄- 25岁,四分位数比(IQR) 21-40。中位随访时间为941(363-1644)天。中位LS为450 (IQR-225-900)。41例(39.8%)患者开始了生物治疗(阿达木单抗-20例(48.7%),英夫利昔单抗-14例(34.1%),维多单抗- 7例(17%))。TimeSformer算法的训练和测试准确率分别为91%和79%,预测生物治疗需求的曲线下面积(AUC)为0.79。而LS的AUC为0.69。在单个GPU上,分析每个完整视频所需的时间为440ms。对新诊断的乳糜泻患者的完整小肠CE视频进行时空分析,可以准确预测是否需要生物治疗。准确度优于人类读者索引。在未来的验证之后,这种方法将允许快速和准确地个性化CD治疗决策。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
P269 Spaciotemporal machine learning analysis of complete small bowel capsule endoscopy videos for prediction of outcomes in Crohn’s disease
Capsule endoscopy (CE) is a prime modality for diagnosis and monitoring of Crohn’s disease (CD). However utilization of CE for monitoring of CE is hampered by prolonged reading time and interobserver variability. Machine learning (ML) techniques such as convolutional neural networks (CNN) are capable of accurate detection and grading of inflammatory findings on isolated images from CE in CD patients, with accuracy above 95%. However, ML-based analysis of complete CE films have not yet been reported; moreover, the predictive utility of ML of CE in CD for disease outcomes has not been examined so far. The study cohort included treatment-naïve CD patients that have performed CE (SBIII, Medtronic) within 6 months of diagnosis of CD and had a minimal follow-up of 6 months. Complete small bowel videos (first duodenal to first cecal image) were extracted using the RAPID reader software, V9.0. Prior to extraction, CE videos were scored using the Lewis score (LS). Clinical, endoscopic and laboratory data were extracted from the electronic medical records. All patients were classified as per start of biological therapy during follow-up. Machine learning analysis was performed by Intel Inc. using TimeSformer computer vision algorithm developed by Facebook. Timesformer algorithm utilizes spaciotemporal The patient cohort included 103 patients (54 (52%) female, median age- 25 years, interquartile ratio (IQR) 21–40). The median duration of follow-up was 941 (363–1644) days. The median LS was 450 (IQR-225–900). Biological therapy was initiated by 41(39.8%) of the patients (adalimumab -20 (48.7%), infliximab-14 (34,1%), vedolizumab- 7 (17%) patients, respectively). TimeSformer algorithm achieved training and testing accuracy of 91% and 79% respectively, with area under the curve (AUC) of 0.79 for prediction of the need for biologic therapy. In comparison, the AUC for LS was 0.69. The required time for analysis per complete video was 440ms on a single GPU. Spaciotemporal analysis of complete small bowel CE videos of newly diagnosed CD patients achieved accurate prediction of the need for biological therapy. The accuracy was superior to that of human reader index. Following future validation, this approach will allow for fast and accurate personalization of treatment decisions in CD.
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