尼日利亚东南部有槽南瓜地方品种的分子特征

E. I. Sussan, E. C. Chinwe, I. A. Amara, A. W. Chibuzo
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引用次数: 0

摘要

有槽南瓜是一种非常重要的蔬菜,因其经济价值和营养作用而在尼日利亚东南部广泛种植。它表现出高度的种间变异性,从而增强了生物多样性。从尼日利亚南部的五个州收集了20个地方品种的凹槽南瓜,其中包括;阿南布拉州、奥贡州、拉各斯州、翁多州和埃努古州。这些地方品种于2013年雨季在拉各斯州立大学植物园种植,用于表型筛选以确定遗传分化。试验采用随机区组设计,设3个重复。基因鉴定在国家医学研究所(NIMER)的生物技术实验室进行。从样品中提取基因组DNA,并利用RAPD - 01、OPR-02、OPC - 04和SCAR-1引物对提取的DNA样本进行PCR扩增,以获得基因型间的多样性。结果揭示了所研究的基因型之间存在巨大的遗传差异。通过单连锁聚类分析,将各基因型按2.0(20%)的相似性划分为5个聚类,这与形态学数据一致,每个聚类含有具有共同特性且彼此相似的凹槽南瓜基因型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular Characterization of Fluted Pumpkin Landraces in South East Nigeria
The fluted pumpkin Telfairia occidentalis (Hook F.) is a very important vegetable, popularly cultivated in South Eastern Nigeria for its economic value and its role in nutrition. It exhibits a high degree of interspecies variability and as such enhances biodiversity. Twenty landraces of fluted pumpkin were collected from five States in southern Nigeria which include; Anambra, Ogun, Lagos, Ondo and Enugu State. The landraces were grown in the Botanical Garden of Lagos State University, Ojo during the rainy season of 2013 for phenotypic screening to determine genetic divergence. The experiment was laid out in randomized block design with three replications. Genetic characterization was conducted in the biotech lab of the national institute of medical research (NIMER). The genomic DNA was extracted from the samples and extracted DNA samples were amplified through the PCR techniques using four primers (RAPD – 01, OPR-02, OPC – 04 and SCAR-1 primer) to access diversity among the genotypes. The result reveals a huge genetic divergence among the genotypes studied. The genotypes were grouped into five clusters based on a 2.0(20%) level of similarity by single linkage cluster analysis, which agrees with morphological data, each containing fluted pumpkin genotypes sharing common properties and being similar to one another.
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