F. Afzaljavan, Negin Chaeichi Tehrani, M. Rivandi, Saeed Zarif Ghasemian, Elham Vahednia, Reza Khayami, Mohammadsajad Abavisani, Alireza Pasdar
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Materials and Methods In this case-control study, blood sample of 622 participants, including 308 breast cancer cases and 314 controls were collected. Genotyping for rs1042522 was conducted by Allele Specific polymerase chain reaction (AS-PCR). In order to set a meta-analysis study, PubMed, Scopus and ISI Web of Knowledge and Persian databases were searched to explore relevant studies, published up to September 2018, containing information on TP53 polymorphism and the risk of breast cancer in Iran. Statistical analysis was performed using SPSS 16.0 and MetaGenyo. Results All retrieved available data as well as the results of our current study were consisted of 1965 breast cancer cases and 1999 healthy controls. No significant difference was observed in allele frequencies between groups (P=0.90) in our study. The cumulative results did not also show any association between rs1042522 and breast cancer risk on the dominant (P=0.61) and recessive (P=0.89) models. Conclusion These findings cannot support contribution of rs1042522 polymorphism to breast cancer risk in an Iranian population. Future larger studies may help confirm this finding with a greater power. .","PeriodicalId":9692,"journal":{"name":"Cell Journal (Yakhteh)","volume":"19 1","pages":"185 - 192"},"PeriodicalIF":0.0000,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":"{\"title\":\"The Dilemma of TP53 Codon 72 Polymorphism (rs1042522) and Breast Cancer Risk: A Case-Control Study and Meta-Analysis in The Iranian Population\",\"authors\":\"F. Afzaljavan, Negin Chaeichi Tehrani, M. Rivandi, Saeed Zarif Ghasemian, Elham Vahednia, Reza Khayami, Mohammadsajad Abavisani, Alireza Pasdar\",\"doi\":\"10.22074/cellj.2020.6458\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Objective Mutations of TP53 as a tumor suppressor gene are frequently observed in different types of cancer. A codon 72 polymorphism located on exon 4 with two alleles encoding either Proline (CCC) or Arginine (CGC) has been indicated as a common variation in association with cancers. Controversial results have been reported regarding the association of allelic polymorphism of codon 72 of TP53 gene and breast cancer risk in Iranian patients. Therefore, a case-control study was designed. A meta-analysis was also carried out to provide evidence of association between this variation and breast cancer in Iran, based on all available published data. Materials and Methods In this case-control study, blood sample of 622 participants, including 308 breast cancer cases and 314 controls were collected. Genotyping for rs1042522 was conducted by Allele Specific polymerase chain reaction (AS-PCR). In order to set a meta-analysis study, PubMed, Scopus and ISI Web of Knowledge and Persian databases were searched to explore relevant studies, published up to September 2018, containing information on TP53 polymorphism and the risk of breast cancer in Iran. Statistical analysis was performed using SPSS 16.0 and MetaGenyo. Results All retrieved available data as well as the results of our current study were consisted of 1965 breast cancer cases and 1999 healthy controls. No significant difference was observed in allele frequencies between groups (P=0.90) in our study. The cumulative results did not also show any association between rs1042522 and breast cancer risk on the dominant (P=0.61) and recessive (P=0.89) models. Conclusion These findings cannot support contribution of rs1042522 polymorphism to breast cancer risk in an Iranian population. Future larger studies may help confirm this finding with a greater power. .\",\"PeriodicalId\":9692,\"journal\":{\"name\":\"Cell Journal (Yakhteh)\",\"volume\":\"19 1\",\"pages\":\"185 - 192\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2019-10-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Cell Journal (Yakhteh)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.22074/cellj.2020.6458\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Cell Journal (Yakhteh)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.22074/cellj.2020.6458","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 5
摘要
目的TP53作为肿瘤抑制基因,在不同类型的肿瘤中经常发生突变。位于外显子4上的密码子72多态性与两个编码脯氨酸(CCC)或精氨酸(CGC)的等位基因已被证明是与癌症相关的常见变异。关于TP53基因密码子72等位基因多态性与伊朗患者乳腺癌风险的关联,有争议的结果被报道。因此,设计了病例对照研究。基于所有可获得的已发表数据,还进行了一项荟萃分析,以提供这种变异与伊朗乳腺癌之间关联的证据。材料与方法在本病例对照研究中,收集了622名参与者的血液样本,其中包括308例乳腺癌患者和314例对照组。采用等位基因特异性聚合酶链反应(AS-PCR)对rs1042522进行基因分型。为了建立一项荟萃分析研究,检索了PubMed、Scopus、ISI Web of Knowledge和波斯语数据库,以探索截至2018年9月发表的相关研究,其中包含伊朗TP53多态性和乳腺癌风险的信息。采用SPSS 16.0和MetaGenyo进行统计学分析。结果所有检索到的数据以及本研究的结果包括1965例乳腺癌病例和1999例健康对照。本研究各组间等位基因频率差异无统计学意义(P=0.90)。累积结果也没有显示rs1042522与显性模型(P=0.61)和隐性模型(P=0.89)之间的任何关联。结论这些发现不能支持rs1042522多态性对伊朗人群乳腺癌风险的贡献。未来更大规模的研究可能有助于更有力地证实这一发现。
The Dilemma of TP53 Codon 72 Polymorphism (rs1042522) and Breast Cancer Risk: A Case-Control Study and Meta-Analysis in The Iranian Population
Objective Mutations of TP53 as a tumor suppressor gene are frequently observed in different types of cancer. A codon 72 polymorphism located on exon 4 with two alleles encoding either Proline (CCC) or Arginine (CGC) has been indicated as a common variation in association with cancers. Controversial results have been reported regarding the association of allelic polymorphism of codon 72 of TP53 gene and breast cancer risk in Iranian patients. Therefore, a case-control study was designed. A meta-analysis was also carried out to provide evidence of association between this variation and breast cancer in Iran, based on all available published data. Materials and Methods In this case-control study, blood sample of 622 participants, including 308 breast cancer cases and 314 controls were collected. Genotyping for rs1042522 was conducted by Allele Specific polymerase chain reaction (AS-PCR). In order to set a meta-analysis study, PubMed, Scopus and ISI Web of Knowledge and Persian databases were searched to explore relevant studies, published up to September 2018, containing information on TP53 polymorphism and the risk of breast cancer in Iran. Statistical analysis was performed using SPSS 16.0 and MetaGenyo. Results All retrieved available data as well as the results of our current study were consisted of 1965 breast cancer cases and 1999 healthy controls. No significant difference was observed in allele frequencies between groups (P=0.90) in our study. The cumulative results did not also show any association between rs1042522 and breast cancer risk on the dominant (P=0.61) and recessive (P=0.89) models. Conclusion These findings cannot support contribution of rs1042522 polymorphism to breast cancer risk in an Iranian population. Future larger studies may help confirm this finding with a greater power. .