{"title":"离散-连续介质膜-颗粒模型中膜介导的力学相互作用能的可微性","authors":"Tobias Kies, C. Graser","doi":"10.4171/ifb/461","DOIUrl":null,"url":null,"abstract":"We consider a discrete-continuum model of a biomembrane with embedded particles. While the membrane is represented by a continuous surface, embedded particles are described by rigid discrete objects which are free to move and rotate in lateral direction. For the membrane we consider a linearized Canham-Helfrich energy functional and height and slope boundary conditions imposed on the particle boundaries resulting in a coupled minimization problem for the membrane shape and particle positions. \nWhen considering the energetically optimal membrane shape for each particle position we obtain a reduced energy functional that models the implicitly given interaction potential for the membrane-mediated mechanical particle-particle interactions. We show that this interaction potential is differentiable with respect to the particle positions and orientations. Furthermore we derive a fully practical representation of the derivative only in terms of well defined derivatives of the membrane. This opens the door for the application of minimization algorithms for the computation of minimizers of the coupled system and for further investigation of the interaction potential of membrane-mediated mechanical particle-particle interaction. \nThe results are illustrated with numerical examples comparing the explicit derivative formula with difference quotient approximations. We furthermore demonstrate the application of the derived formula to implement a gradient flow for the approximation of optimal particle configurations.","PeriodicalId":13863,"journal":{"name":"Interfaces and Free Boundaries","volume":"5 1","pages":""},"PeriodicalIF":1.2000,"publicationDate":"2017-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"On differentiability of the membrane-mediated mechanical interaction energy of discrete–continuum membrane–particle models\",\"authors\":\"Tobias Kies, C. Graser\",\"doi\":\"10.4171/ifb/461\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We consider a discrete-continuum model of a biomembrane with embedded particles. While the membrane is represented by a continuous surface, embedded particles are described by rigid discrete objects which are free to move and rotate in lateral direction. For the membrane we consider a linearized Canham-Helfrich energy functional and height and slope boundary conditions imposed on the particle boundaries resulting in a coupled minimization problem for the membrane shape and particle positions. \\nWhen considering the energetically optimal membrane shape for each particle position we obtain a reduced energy functional that models the implicitly given interaction potential for the membrane-mediated mechanical particle-particle interactions. We show that this interaction potential is differentiable with respect to the particle positions and orientations. Furthermore we derive a fully practical representation of the derivative only in terms of well defined derivatives of the membrane. This opens the door for the application of minimization algorithms for the computation of minimizers of the coupled system and for further investigation of the interaction potential of membrane-mediated mechanical particle-particle interaction. \\nThe results are illustrated with numerical examples comparing the explicit derivative formula with difference quotient approximations. We furthermore demonstrate the application of the derived formula to implement a gradient flow for the approximation of optimal particle configurations.\",\"PeriodicalId\":13863,\"journal\":{\"name\":\"Interfaces and Free Boundaries\",\"volume\":\"5 1\",\"pages\":\"\"},\"PeriodicalIF\":1.2000,\"publicationDate\":\"2017-11-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Interfaces and Free Boundaries\",\"FirstCategoryId\":\"100\",\"ListUrlMain\":\"https://doi.org/10.4171/ifb/461\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MATHEMATICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Interfaces and Free Boundaries","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.4171/ifb/461","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MATHEMATICS","Score":null,"Total":0}
On differentiability of the membrane-mediated mechanical interaction energy of discrete–continuum membrane–particle models
We consider a discrete-continuum model of a biomembrane with embedded particles. While the membrane is represented by a continuous surface, embedded particles are described by rigid discrete objects which are free to move and rotate in lateral direction. For the membrane we consider a linearized Canham-Helfrich energy functional and height and slope boundary conditions imposed on the particle boundaries resulting in a coupled minimization problem for the membrane shape and particle positions.
When considering the energetically optimal membrane shape for each particle position we obtain a reduced energy functional that models the implicitly given interaction potential for the membrane-mediated mechanical particle-particle interactions. We show that this interaction potential is differentiable with respect to the particle positions and orientations. Furthermore we derive a fully practical representation of the derivative only in terms of well defined derivatives of the membrane. This opens the door for the application of minimization algorithms for the computation of minimizers of the coupled system and for further investigation of the interaction potential of membrane-mediated mechanical particle-particle interaction.
The results are illustrated with numerical examples comparing the explicit derivative formula with difference quotient approximations. We furthermore demonstrate the application of the derived formula to implement a gradient flow for the approximation of optimal particle configurations.
期刊介绍:
Interfaces and Free Boundaries is dedicated to the mathematical modelling, analysis and computation of interfaces and free boundary problems in all areas where such phenomena are pertinent. The journal aims to be a forum where mathematical analysis, partial differential equations, modelling, scientific computing and the various applications which involve mathematical modelling meet. Submissions should, ideally, emphasize the combination of theory and application.