花生WRKY转录因子的鉴定及表达分析

B. Suchithra, V. Devaraj, J. Ghosh, R. Nageshbabu
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引用次数: 1

摘要

花生(arachhis hypogaea L.)是半干旱热带地区重要的自给油料作物,经常受到多种环境因素(高温、干旱和重金属)的影响。WRKY转录因子(TF)是主要调控因子之一,在应激反应中起着至关重要的作用。然而,迄今为止,关于花生WRKY基因的功能特征和耐受性机制的研究还很少。本研究对WRKY TF基因家族进行了系统发育、蛋白特征、基因结构和基序分析。研究了10个WRKY基因在高温、干旱和重金属(CdCl 2)胁迫下在不同组织中的表达谱。AhWRKY (arachhis hypogaea WRKY)蛋白大部分呈聚类,与拟南芥和甘氨酸max关系密切。对AhWRKY基因的RT- qPCR分析显示,在至少一种非生物胁迫下,AhWRKY基因在转录物丰度或表达模式上存在差异。其中,AhWRKY41的表达量在所有胁迫条件下均最高。另一方面,AhWRKY20和AhWRKY22表达下调。结果表明,AhWRKY41可能在干旱/高温/重金属胁迫中发挥正向调控作用,并通过激活胁迫相关基因表达表现出胁迫耐受机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Characterization and Expression Analysis of WRKY Transcription Factors in Groundnut (Arachis hypogaea L.)
Groundnut (Arachis hypogaea L.), is an important subsistence oil yielding crop of the semi-arid tropics and often exposed to several environmental cues (high temperature, drought & heavy metal). The WRKY transcription factor (TF) is one of the master regulator, and play vital role in stress responses. However, far less information is available on functional characterization and tolerance mechanism of stress responsive WRKY genes in groundnut till date. In this study, a comprehensive phylogenetic, protein features, gene structure and motif analysis of WRKY TF gene family was carried out. We conducted expression profiling of 10 WRKY genes under high temperature, drought and heavy metal (CdCl 2 ) in various tissues. Majority of the AhWRKY ( Arachis hypogaea WRKY ) proteins were clustered and share close relationship with Arabidopsis and Glycine max . RT- qPCR analysis of AhWRKY genes revealed differential expression either in their transcript abundance or in their expression patterns in response to at least one abiotic stress. In particular, AhWRKY41 expression level was found to be maximum in all the stress conditions . On the other hand, AhWRKY20 and AhWRKY22 were down regulated. The obtained data demonstrate that AhWRKY41 may act as a positive regulator in drought/ high temperature/ heavy metal and would exhibit stress tolerance mechanism by activation of stress-associated gene expression.
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