使用单基因进行癌症分类。

Xiaosheng Wang, O. Gotoh
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引用次数: 27

摘要

我们提出了一种基于单个基因表达谱的癌症She分类方法。根据类对基因的依赖程度选择具有高类区分能力的基因。然后,我们根据所选择的单个基因诱导的决策规则构建分类器。我们在三个公开的癌症基因表达数据集上测试了我们的单基因分类方法。在大多数情况下,我们只需利用一个基因就可以获得相对准确的分类结果。发现了一些与癌症发病机制高度相关的基因。我们的特征选择和分类方法都是基于粗糙集,一种机器学习方法。与其他方法相比,该方法简单、有效、鲁棒性好。我们的结论是,如果合理地实施基因选择,基于基因表达谱的非常简单的预测模型就可以实现准确的癌症分子分类。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Cancer classification using single genes.
We present a method for She classification of cancer based on gene expression profiles using single genes. We select the genes with high class-discrimination capability according to their depended degree by the classes. We then build classifiers based on the decision rules induced by single genes selected. We test our single-gene classification method on three publicly available cancerous gene expression datasets. In a majority of cases, we gain relatively accurate classification outcomes by just utilizing one gene. Some genes highly correlated with the pathogenesis of cancer are identified. Our feature selection and classification approaches are both based on rough sets, a machine learning method. In comparison with other methods, our method is simple, effective and robust. We conclude that, if gene selection is implemented reasonably, accurate molecular classification of cancer can be achieved with very simple predictive models based on gene expression profiles.
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