RAPD指纹图谱分析印度塔沙蚕微孢子虫分离株的遗传多样性及系统发育关系

W. Hassan, B. S. Nath
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The spore pellet was Percoll purified by gradient centrifugation as described by Undeen and Alger (1971). Each of the purified microsporidian isolates were maintained in vivo in isolation, through per oral inoculation and designated as MIJ-1sG, MIJ-2bG, MIJ-3gG, MIJ-4mG, MIJ-1jD, MIJ-2pD, MIJ-3sD, MIJ-4cD, MIJ-5mD, MIJ-1kDm, MIJ-1gDn, MIJ-1bR, MIJ-2pR, MIJ-3rR, MIJ-1kK, MIJ-1gC, MIJ-1cWS, MIJ-2mWS, MIJ-3gWS, MIJ-4nWS, MIJ-1cES and MIJ-2dES along with type species NIK-1s_mys. The details of microsporidian isolates, places of collection, host, shape and size are presented in Table 1. Measurement of spore length and width. The morphology of purified spores was observed under phase contrast microscope. The length and width of spores were measured according to the method of Undeen and Vavra (1997). Fresh spores were spread in water agar on glass micro-slides and measured using an At present, tasar silk production has increased considerably; but even after there is huge gap in the production and demand. The important reasons for the low production are attributed to traditional rearing on trees in a natural habitat, which exposes the larvae to a number of diseases caused by microbial pathogens apart from the natural calamities. As tasar silkworm rearing is outdoor in nature, it is affected by several diseases viz., microsporidiosis, virosis, bacteriosis and muscardine. The crop loss in tasar culture due to silkworm diseases varies from 40 50% (Sing et al. 2011). The disease caused by the microsporidian, Nosema bombycis is the most devastating in tasar silkworms and inflicts severe cocoon crop loss and passed onto the next generation transovarially. Microsporidia are a diverse group of spore-forming obligate intracellular parasites including more than 1300 formally described species in 160 genera (Wittner and Weiss 1999, Keeling 2009). Microsporidia are unique eukaryotes, which do not possess centrioles, and mitochondrial apparatus, although nuclei are present in distinct number (Vossbrinck and Woese 1986, Vossbrinck et al. 1987). These parasites infect a wide range of invertebrates and vertebrates including insects, fishes, mammals and protists (Wittner and Weiss 1999, Wasson and Peper 2000, Weiss 2001). Large numbers of new microsporidian species are designated based on morphology, ultrastructure, life cycle and host–parasite relationships. Molecular phylogenetic analysis based on DNA marker profiles have largely overcome the problems associated with ultrastructural and phenotype-based classification systems (Baker et al. 1995, Hartskeerl et al. 1995, Mathis et al. 1997, Hung et al. 1998). Random Amplified Polymorphic DNA-PCR assay using a set of primers of arbitrary nucleotide sequences (Welsh and McClelland 1990, Williams et al. 1990) has been described as potential molecular marker system for the analysis of genetic diversity and phylogeny in a wide variety of organisms (Hadrys et al. 1992, Lu and Rank 1996). RAPD technique has been utilized to generate molecular markers for determining the genetic diversity and phylogenetic relationship among Nosema species/strains (Tsai et al. 2003, Rao et al. 2007, Nath et al. 2011). The paper reports the genetic diversity of microsporidians infecting tasar silkworm (A. mylitta), isolated from varied geographical forest locations in the State of Jharkhand (India) using RAPD-PCR technique. Fig. 1. Map of Jharkhand showing the distribution of tropical tasar, A. mylitta in nine geographical forest areas. Int. J. Indust. Entomol. Vol. 29, No. (2), pp. 169-178 (2014) 170 171 Ta bl e 1 . D et ai ls of th e t w en ty th re e m ic ro sp or id ia n iso la te s a nd ty pe sp ec ie s: th ei r p la ce o f c ol le ct io n, h os t a nd m or ph ol og y","PeriodicalId":14140,"journal":{"name":"International journal of industrial entomology","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2014-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Genetic Diversity and Phylogenetic Relationships among Microsporidian Isolates from the Indian Tasar Silkworm, Antheraea mylitta, as Revealed by RAPD Fingerprinting Technique\",\"authors\":\"W. Hassan, B. S. Nath\",\"doi\":\"10.7852/IJIE.2014.29.2.169\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Wazid Hassan and B. Surendra Nath Genetic diversity and phylogenetic relationships among microsporidians isolates from the Indian tasar silkworm...... 170 171 Materials and Methods Origin of microsporidian isolates. 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Each of the purified microsporidian isolates were maintained in vivo in isolation, through per oral inoculation and designated as MIJ-1sG, MIJ-2bG, MIJ-3gG, MIJ-4mG, MIJ-1jD, MIJ-2pD, MIJ-3sD, MIJ-4cD, MIJ-5mD, MIJ-1kDm, MIJ-1gDn, MIJ-1bR, MIJ-2pR, MIJ-3rR, MIJ-1kK, MIJ-1gC, MIJ-1cWS, MIJ-2mWS, MIJ-3gWS, MIJ-4nWS, MIJ-1cES and MIJ-2dES along with type species NIK-1s_mys. The details of microsporidian isolates, places of collection, host, shape and size are presented in Table 1. Measurement of spore length and width. The morphology of purified spores was observed under phase contrast microscope. The length and width of spores were measured according to the method of Undeen and Vavra (1997). Fresh spores were spread in water agar on glass micro-slides and measured using an At present, tasar silk production has increased considerably; but even after there is huge gap in the production and demand. 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Microsporidia are unique eukaryotes, which do not possess centrioles, and mitochondrial apparatus, although nuclei are present in distinct number (Vossbrinck and Woese 1986, Vossbrinck et al. 1987). These parasites infect a wide range of invertebrates and vertebrates including insects, fishes, mammals and protists (Wittner and Weiss 1999, Wasson and Peper 2000, Weiss 2001). Large numbers of new microsporidian species are designated based on morphology, ultrastructure, life cycle and host–parasite relationships. Molecular phylogenetic analysis based on DNA marker profiles have largely overcome the problems associated with ultrastructural and phenotype-based classification systems (Baker et al. 1995, Hartskeerl et al. 1995, Mathis et al. 1997, Hung et al. 1998). Random Amplified Polymorphic DNA-PCR assay using a set of primers of arbitrary nucleotide sequences (Welsh and McClelland 1990, Williams et al. 1990) has been described as potential molecular marker system for the analysis of genetic diversity and phylogeny in a wide variety of organisms (Hadrys et al. 1992, Lu and Rank 1996). RAPD technique has been utilized to generate molecular markers for determining the genetic diversity and phylogenetic relationship among Nosema species/strains (Tsai et al. 2003, Rao et al. 2007, Nath et al. 2011). The paper reports the genetic diversity of microsporidians infecting tasar silkworm (A. mylitta), isolated from varied geographical forest locations in the State of Jharkhand (India) using RAPD-PCR technique. Fig. 1. Map of Jharkhand showing the distribution of tropical tasar, A. mylitta in nine geographical forest areas. Int. J. Indust. Entomol. Vol. 29, No. (2), pp. 169-178 (2014) 170 171 Ta bl e 1 . 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引用次数: 2

摘要

Wazid Hassan和B. Surendra Nath印度沙蚕微孢子虫分离株的遗传多样性和系统发育关系......微孢子虫分离物的材料与方法。2010 - 2013年,在贾坎德邦不同地理保护区(吉里迪、德奥哈尔、杜姆卡、丹巴德、哈尔沙万、柴巴沙、西辛格布姆、东辛格布姆和兰齐)采集到小孢子虫22只。印度(图1和表1)。从感染的tasar蚕蛾中通过浸渍分离出微孢子孢子,将其悬浮在0.85%的NaCl中,然后用奶酪布过滤,以3500 r/min的速度离心10分钟。按照Undeen和Alger(1971)的描述,用Percoll梯度离心纯化孢子球。每个纯化的微孢子虫分离株通过口服接种在体内保持分离,并被命名为MIJ-1sG、MIJ-2bG、MIJ-3gG、MIJ-4mG、MIJ-1jD、MIJ-2pD、MIJ-3sD、MIJ-4cD、MIJ-5mD、MIJ-1kDm、MIJ-1gDn、MIJ-1bR、MIJ-2pR、MIJ-3rR、MIJ-1kK、MIJ-1gC、MIJ-1cWS、MIJ-2mWS、MIJ-3gWS、MIJ-4nWS、MIJ-1cES和MIJ-2dES以及类型种NIK-1s_mys。微孢子虫分离株、采集地点、寄主、形状和大小的详细情况见表1。测量孢子的长度和宽度。在相差显微镜下观察纯化孢子的形态。孢子的长度和宽度根据Undeen和Vavra(1997)的方法测定。将新鲜孢子散布于玻璃微玻片上的琼脂水中,并利用微玻片进行测量。但即使在生产和需求方面也存在巨大差距。造成产量低的重要原因是传统的在自然栖息地的树上饲养,除了自然灾害外,还使幼虫暴露于许多由微生物病原体引起的疾病。由于柞蚕是在室外饲养的,因此易受微孢子虫病、病毒病、细菌病和蝇蛆病等病害的影响。桑蚕病害造成的tasar栽培作物损失从40 - 50%不等(Sing et al. 2011)。这种由微孢子虫(Nosema bombycis)引起的疾病对沙蚕的危害最大,造成严重的蚕茧损失,并经卵巢遗传给下一代。微孢子虫是一种多样的形成孢子的专性细胞内寄生虫,包括160属1300多种正式描述的物种(Wittner and Weiss 1999, Keeling 2009)。微孢子虫是一种独特的真核生物,它不具有中心粒和线粒体装置,尽管细胞核数量不同(Vossbrinck and Woese 1986, Vossbrinck et al. 1987)。这些寄生虫感染广泛的无脊椎动物和脊椎动物,包括昆虫、鱼类、哺乳动物和原生生物(Wittner and Weiss 1999; Wasson and pepper 2000; Weiss 2001)。根据微孢子虫的形态、超微结构、生命周期和寄主-寄生虫关系,发现了大量的微孢子虫新种。基于DNA标记谱的分子系统发育分析在很大程度上克服了与超微结构和基于表型的分类系统相关的问题(Baker et al. 1995, Hartskeerl et al. 1995, Mathis et al. 1997, Hung et al. 1998)。随机扩增多态性DNA-PCR检测使用一组任意核苷酸序列的引物(Welsh and McClelland 1990, Williams et al. 1990)被描述为分析多种生物遗传多样性和系统发育的潜在分子标记系统(Hadrys et al. 1992, Lu and Rank 1996)。RAPD技术已被用于生成分子标记,以确定小虫种/株之间的遗传多样性和系统发育关系(Tsai et al. 2003, Rao et al. 2007, Nath et al. 2011)。本文利用RAPD-PCR技术对印度贾坎德邦不同森林地区分离的塔沙蚕(A. mylitta)微孢子虫的遗传多样性进行了分析。图1所示。贾坎德邦的地图,显示了热带tasar, A. mylitta在九个地理森林区域的分布。Int。j .的尘埃。Entomol。第29卷第1期(2), pp. 169-178(2014) 170 171。我把这些东西都拿出来,把它们拿出来,把它们拿出来,把它们拿出来,把它们拿出来,把它们拿出来,把它们拿出来,把它们拿出来,把它们拿出来
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Genetic Diversity and Phylogenetic Relationships among Microsporidian Isolates from the Indian Tasar Silkworm, Antheraea mylitta, as Revealed by RAPD Fingerprinting Technique
Wazid Hassan and B. Surendra Nath Genetic diversity and phylogenetic relationships among microsporidians isolates from the Indian tasar silkworm...... 170 171 Materials and Methods Origin of microsporidian isolates. Twenty two microsporidians were collected from individual infected tasar silkmoths of A. mylitta during the survey conducted from 2010 to 2013 in different geographic reserved forests areas (districts of Giridih, Deoghar, Dumka, Dhanbad, Kharshawan, Chaibasha, WestSinghbhum, East-Singhbhum and Ranchi in Jharkhand State, India (Fig. 1 and Table 1). Microsporidian spores were isolated from infected tasar silkmoths by maceration and suspended them in 0.85% NaCl followed by filtration through cheese cloth and centrifugation at 3500 r/min for 10 min. The spore pellet was Percoll purified by gradient centrifugation as described by Undeen and Alger (1971). Each of the purified microsporidian isolates were maintained in vivo in isolation, through per oral inoculation and designated as MIJ-1sG, MIJ-2bG, MIJ-3gG, MIJ-4mG, MIJ-1jD, MIJ-2pD, MIJ-3sD, MIJ-4cD, MIJ-5mD, MIJ-1kDm, MIJ-1gDn, MIJ-1bR, MIJ-2pR, MIJ-3rR, MIJ-1kK, MIJ-1gC, MIJ-1cWS, MIJ-2mWS, MIJ-3gWS, MIJ-4nWS, MIJ-1cES and MIJ-2dES along with type species NIK-1s_mys. The details of microsporidian isolates, places of collection, host, shape and size are presented in Table 1. Measurement of spore length and width. The morphology of purified spores was observed under phase contrast microscope. The length and width of spores were measured according to the method of Undeen and Vavra (1997). Fresh spores were spread in water agar on glass micro-slides and measured using an At present, tasar silk production has increased considerably; but even after there is huge gap in the production and demand. The important reasons for the low production are attributed to traditional rearing on trees in a natural habitat, which exposes the larvae to a number of diseases caused by microbial pathogens apart from the natural calamities. As tasar silkworm rearing is outdoor in nature, it is affected by several diseases viz., microsporidiosis, virosis, bacteriosis and muscardine. The crop loss in tasar culture due to silkworm diseases varies from 40 50% (Sing et al. 2011). The disease caused by the microsporidian, Nosema bombycis is the most devastating in tasar silkworms and inflicts severe cocoon crop loss and passed onto the next generation transovarially. Microsporidia are a diverse group of spore-forming obligate intracellular parasites including more than 1300 formally described species in 160 genera (Wittner and Weiss 1999, Keeling 2009). Microsporidia are unique eukaryotes, which do not possess centrioles, and mitochondrial apparatus, although nuclei are present in distinct number (Vossbrinck and Woese 1986, Vossbrinck et al. 1987). These parasites infect a wide range of invertebrates and vertebrates including insects, fishes, mammals and protists (Wittner and Weiss 1999, Wasson and Peper 2000, Weiss 2001). Large numbers of new microsporidian species are designated based on morphology, ultrastructure, life cycle and host–parasite relationships. Molecular phylogenetic analysis based on DNA marker profiles have largely overcome the problems associated with ultrastructural and phenotype-based classification systems (Baker et al. 1995, Hartskeerl et al. 1995, Mathis et al. 1997, Hung et al. 1998). Random Amplified Polymorphic DNA-PCR assay using a set of primers of arbitrary nucleotide sequences (Welsh and McClelland 1990, Williams et al. 1990) has been described as potential molecular marker system for the analysis of genetic diversity and phylogeny in a wide variety of organisms (Hadrys et al. 1992, Lu and Rank 1996). RAPD technique has been utilized to generate molecular markers for determining the genetic diversity and phylogenetic relationship among Nosema species/strains (Tsai et al. 2003, Rao et al. 2007, Nath et al. 2011). The paper reports the genetic diversity of microsporidians infecting tasar silkworm (A. mylitta), isolated from varied geographical forest locations in the State of Jharkhand (India) using RAPD-PCR technique. Fig. 1. Map of Jharkhand showing the distribution of tropical tasar, A. mylitta in nine geographical forest areas. Int. J. Indust. Entomol. Vol. 29, No. (2), pp. 169-178 (2014) 170 171 Ta bl e 1 . D et ai ls of th e t w en ty th re e m ic ro sp or id ia n iso la te s a nd ty pe sp ec ie s: th ei r p la ce o f c ol le ct io n, h os t a nd m or ph ol og y
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