l -组氨酸两种多态在5、105和295 K下的精确h原子参数

G. Novelli, C. McMonagle, F. Kleemiss, M. Probert, H. Puschmann, S. Grabowsky, H. Maynard-Casely, G. McIntyre, S. Parsons
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引用次数: 0

摘要

利用单晶中子衍射首次测定了一级氨基酸l -组氨酸单斜晶型的晶体结构,并用非孪晶重新研究了正交晶型的晶体结构,提高了实验的精度和准确性。在5k、105 K和295 K的温度下,采集了每种晶型的中子衍射数据。在相同温度下进行了单晶x射线衍射实验。用Pixel方法计算分子间相互作用能来解释这两种多晶态的晶体排列,显示出沿c方向形成的氢键的能量和几何形状的差异。利用5 K时收集的x射线衍射数据,探讨了在NoSpherA2中实现的新Hirshfeld原子精化方法的精度和准确性,选择了不同的官能团和基集设置,以及使用显式分子簇和增强的H原子刚体约束。比较了等效原子坐标和各向异性位移参数,发现它们与相应的中子结构模型的结果吻合得很好。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Accurate H-atom parameters for the two polymorphs of L-histidine at 5, 105 and 295 K
The crystal structure of the monoclinic polymorph of the primary amino acid L-histidine has been determined for the first time by single-crystal neutron diffraction, while that of the orthorhombic polymorph has been reinvestigated with an untwinned crystal, improving the experimental precision and accuracy. For each polymorph, neutron diffraction data were collected at 5, 105 and 295 K. Single-crystal X-ray diffraction experiments were also performed at the same temperatures. The two polymorphs, whose crystal packing is interpreted by intermolecular interaction energies calculated using the Pixel method, show differences in the energy and geometry of the hydrogen bond formed along the c direction. Taking advantage of the X-ray diffraction data collected at 5 K, the precision and accuracy of the new Hirshfeld atom refinement method implemented in NoSpherA2 were probed choosing various settings of the functionals and basis sets, together with the use of explicit clusters of molecules and enhanced rigid-body restraints for H atoms. Equivalent atomic coordinates and anisotropic displacement parameters were compared and found to agree well with those obtained from the corresponding neutron structural models.
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