{"title":"星形细胞瘤基于靶点的计算药物重新定位","authors":"M. Manzoor, I. Aslam, S. Azam, Zanib Khan","doi":"10.3329/ICPJ.V5I8.28874","DOIUrl":null,"url":null,"abstract":"Drug reposition is innovative method as it provides new ways to measure drug kinetics, multiplexed assays and others. In drug repositioning already approved drugs are used due to which time is not wasted on initial clinical trials. Market attainment cost for repositioned drugs is far less than the market attainment cost for new drugs. The secondary indications of most of the approved drugs and the availability of approved drug databases can provide an efficient way of searching safer drugs for new indications. Drug repositioning can provide an alternative method to explore the safe anti-cancer agents. Astrocytoma is the one type of Brain tumor. There are four types of Astrocytoma which arise in different part of the brain. The type IV that is Glioblastoma is very aggressive form of it. Many genes are involved in spreading of this disease but it is normally caused by Tp53. Mutations in the Tp53 gene are identified in about 28% of de novo GBM and 65% of secondary , thus indicating that Tp53 abnormalities are common in the progression of disease. The structure for Tp53 protein was obtained from RCSB PDB: RCSB Protein Data Bank. For repositioning Drugs are randomly selected from Drug Bank. Those drugs which have fewer side effects as compared to the drugs for Glioblastoma are selected as a candidate compounds for docking. Patch Dock server was used to perform molecular docking. Then among all selected drugs, some drugs are reposition on the basis of significant binding interactions with target protein TP53. Manzoor et al., International Current Pharmaceutical Journal, July 2016, 5(8): 63-68 http://www.icpjonline.com/documents/Vol5Issue8/01.pdf","PeriodicalId":13811,"journal":{"name":"International Current Pharmaceutical Journal","volume":"191 1","pages":"63-68"},"PeriodicalIF":0.0000,"publicationDate":"2016-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Target Based Computational Drug Repositioning for Astrocytoma\",\"authors\":\"M. Manzoor, I. Aslam, S. Azam, Zanib Khan\",\"doi\":\"10.3329/ICPJ.V5I8.28874\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Drug reposition is innovative method as it provides new ways to measure drug kinetics, multiplexed assays and others. In drug repositioning already approved drugs are used due to which time is not wasted on initial clinical trials. Market attainment cost for repositioned drugs is far less than the market attainment cost for new drugs. The secondary indications of most of the approved drugs and the availability of approved drug databases can provide an efficient way of searching safer drugs for new indications. Drug repositioning can provide an alternative method to explore the safe anti-cancer agents. Astrocytoma is the one type of Brain tumor. There are four types of Astrocytoma which arise in different part of the brain. The type IV that is Glioblastoma is very aggressive form of it. Many genes are involved in spreading of this disease but it is normally caused by Tp53. Mutations in the Tp53 gene are identified in about 28% of de novo GBM and 65% of secondary , thus indicating that Tp53 abnormalities are common in the progression of disease. The structure for Tp53 protein was obtained from RCSB PDB: RCSB Protein Data Bank. For repositioning Drugs are randomly selected from Drug Bank. Those drugs which have fewer side effects as compared to the drugs for Glioblastoma are selected as a candidate compounds for docking. Patch Dock server was used to perform molecular docking. Then among all selected drugs, some drugs are reposition on the basis of significant binding interactions with target protein TP53. Manzoor et al., International Current Pharmaceutical Journal, July 2016, 5(8): 63-68 http://www.icpjonline.com/documents/Vol5Issue8/01.pdf\",\"PeriodicalId\":13811,\"journal\":{\"name\":\"International Current Pharmaceutical Journal\",\"volume\":\"191 1\",\"pages\":\"63-68\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-07-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Current Pharmaceutical Journal\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3329/ICPJ.V5I8.28874\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Current Pharmaceutical Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3329/ICPJ.V5I8.28874","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
药物重新定位是一种创新的方法,它提供了新的方法来测量药物动力学,多重分析等。在药物重新定位中,使用已经批准的药物,因为这样就不会浪费时间在最初的临床试验上。重新定位药品的市场获得成本远低于新药的市场获得成本。大多数已批准药物的次要适应症和已批准药物数据库的可用性可以为寻找更安全的药物的新适应症提供有效的方法。药物重新定位可以为探索安全的抗癌药物提供一种替代方法。星形细胞瘤是脑肿瘤的一种。星形细胞瘤有四种类型,它们出现在大脑的不同部位。IV型胶质母细胞瘤具有很强的侵袭性。许多基因参与了这种疾病的传播,但它通常是由Tp53引起的。约28%的新发GBM和65%的继发GBM中发现Tp53基因突变,这表明Tp53异常在疾病进展中很常见。Tp53蛋白的结构来源于RCSB PDB: RCSB protein Data Bank。从药库中随机抽取药品进行重新定位。与治疗胶质母细胞瘤的药物相比,副作用更小的药物被选择作为对接的候选化合物。采用Patch Dock服务器进行分子对接。然后在所有选择的药物中,一些药物根据与靶蛋白TP53的显著结合相互作用而重新定位。Manzoor等,国际药学杂志,2016,5(8):63-68 http://www.icpjonline.com/documents/Vol5Issue8/01.pdf
Target Based Computational Drug Repositioning for Astrocytoma
Drug reposition is innovative method as it provides new ways to measure drug kinetics, multiplexed assays and others. In drug repositioning already approved drugs are used due to which time is not wasted on initial clinical trials. Market attainment cost for repositioned drugs is far less than the market attainment cost for new drugs. The secondary indications of most of the approved drugs and the availability of approved drug databases can provide an efficient way of searching safer drugs for new indications. Drug repositioning can provide an alternative method to explore the safe anti-cancer agents. Astrocytoma is the one type of Brain tumor. There are four types of Astrocytoma which arise in different part of the brain. The type IV that is Glioblastoma is very aggressive form of it. Many genes are involved in spreading of this disease but it is normally caused by Tp53. Mutations in the Tp53 gene are identified in about 28% of de novo GBM and 65% of secondary , thus indicating that Tp53 abnormalities are common in the progression of disease. The structure for Tp53 protein was obtained from RCSB PDB: RCSB Protein Data Bank. For repositioning Drugs are randomly selected from Drug Bank. Those drugs which have fewer side effects as compared to the drugs for Glioblastoma are selected as a candidate compounds for docking. Patch Dock server was used to perform molecular docking. Then among all selected drugs, some drugs are reposition on the basis of significant binding interactions with target protein TP53. Manzoor et al., International Current Pharmaceutical Journal, July 2016, 5(8): 63-68 http://www.icpjonline.com/documents/Vol5Issue8/01.pdf