基于RAPD标记的巴厘Bukit Tapak、Tabanan、Bukit Tapak柽柳遗传多样性研究

M. Pharmawati, I. Wijaya
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引用次数: 0

摘要

凤尾龙是足足龙科的一种。在巴厘岛,在塔巴南摄区的武吉塔巴克发现了D. imbricatus。本种是武吉他帕克的优势种之一。利用RAPD (Random Amplified Polymorphic DNA,随机扩增多态性DNA)分子标记技术,对武吉他帕克地区布氏滴虫的遗传变异进行了研究。为了获得对该物种的保护信息,需要对其遗传多样性进行研究。叶子样本取自巴厘岛的Bukit Tapak, Candikuning, Baturiti, Tabanan Regency。先用CTAB法提取DNA,再用氯仿异戊醇提取。用乙醇进行DNA沉淀。采用聚合酶链反应(PCR)对4个引物进行RAPD分析。PCR产物采用琼脂糖凝胶电泳和溴化乙啶染色。结果表明,扩增的DNA条带范围为1 ~ 5条,条带大小为230 bp ~ 422 bp。根据H、D、R值,只有OPA4和UBC106引物可以检测布氏滴虫的多样性。检测到的遗传变异较低,平均多态性为32.5%,样本之间的相似度为0.51 ~ 1
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genetic Diversity of Dacrycarpus imbricatus At Bukit Tapak, Tabanan, Bali Based on RAPD Marker
Dacrycarpus imbricatus Blume is a member of the Podocarpaceae family. In Bali, D. imbricatus was found in Bukit Tapak, Tabanan Regency. This species is one of the dominant species in Bukit Tapak. This study aimed to determine the genetic variation of D. imbricatus in Bukit Tapak using molecular markers RAPD (Random Amplified Polymorphic DNA). The genetic diversity of D. imbricatus needs to be studied to obtain the information used for the conservation of this species. Leaf samples were taken from Bukit Tapak, Candikuning, Baturiti, Tabanan Regency, Bali. DNA was extracted using the CTAB method, followed by extraction using chloroform: isoamyl alcohol. DNA precipitation was carried out using ethanol. RAPD analysis was performed using polymerase chain reaction (PCR) using four primers. PCR products were visualized using agarose gel electrophoresis and ethidium bromide staining. The results showed that the amplified DNA bands ranged from 1 to 5 bands with DNA band sizes ranging from 230 bp - 422 bp. Only OPA4 and UBC106 primers can be used to detect D. imbricatus diversity based on the H, D, and R values. The detected genetic variation is low, as indicated by an average polymorphism of 32.5% and similarities between samples ranging from 0.51 to 1
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