基于形态描述子和SSR DNA指纹图谱的小粟(Panicum sumatrense)品种鉴定

Senthilkumar A. Natesan, Gayathri Venugopalan, S. Selvamani, Madhumitha Krishnamoorthy, Sarankumar Chandran, Nirmalakumari Angamuthu
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引用次数: 3

摘要

小小米(Panicum sumatrense)也被称为印度小米。它作为一种谷物在尼泊尔、印度和缅甸西部种植,它的起源中心是西非。小小米的野生近亲是psilopodium。它在印度东高止山脉的部落农业中起着重要作用。小小米生长在温带和热带气候。小小米是一种一年生丛生的草,有纤细的秆,柔软的叶,花序一圆锥花序具直立有毛的枝,小穗成对具二颖片。在谷物中发现共合区,有助于鉴定重要农业形态性状的有用等位基因。Ali等[2]早前在37份小小米材料中开发出48个EST-SSR标记。关于小小米种质资源遗传多样性的报道有限,也是基于有限数量的DNA标记[3,4]。因此,由于小谷子的序列信息有限,需要从玉米、稗子和珍珠谷子中寻找可用的标记,这是由于谷子的同质性和SSR标记的可用性。这种带壳的小谷子像大米一样被煮熟,有时被制成面粉,用于制作不同类型的食物。软稻草对牛来说是可口的,绿色植物有潜力成为速生饲料。利用小谷子基因型的显著性、均匀性和稳定性(DUS)特征,利用其在植物品种保护和农民权利管理局(PPVFRA)注册中的特性,对新发布的小谷子基因型和现有小谷子基因型进行综合鉴定,并对其进行种质鉴别。谷类作物的DNA标记具有跨属可转移性,如玉米。小粟(Panicum sumatrense)品种的形态描述子和基于SSR的DNA指纹鉴定
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Characterization of Little millet (Panicum sumatrense) varieties using Morphological descriptors and SSR based DNA fingerprinting
Little millet (Panicum sumatrense) is also known as Indian millet. It is cultivated as a cereal across Nepal, India and Western Myanmar, and its center of origin is West Africa. The wild relative of little millet is P.psilopodium. It forms an important role in tribal agriculture in Eastern Ghats of India. Little millet is grown on temperate and tropical climate. Little millet is an annual tuffed grass with slender culms, soft leaves, inflorescence a panicle with erect hairy branches, spikelets in pairs with two glumes. The discovery of syntenic regions among the cereals which aids to identify useful alleles of important agromorphological traits. An earlier study by Ali et al [2] developed 48 EST-SSR markers among 37 accessions of the little millets. Only limited reports are available on the genetic diversity of little millet germplasm, that too is based on a limited number of DNA markers [3, 4]. Thus the limited sequence information available in the little millets necessitates the search for the available markers from the maize, barnyard millet, and pearl millet due to the cereal millet synteny and also the availability of the SSR markers. The little millet husked grain is cooked as like rice and sometimes made into flour for different types of food preparations. The soft straw is palatable to cattle and the green plant has potentialities as a quick-growing fodder. The present investigation was conducted to carry out the comprehensive characterization of little millet genotypes based on Distinctness, Uniformity and Stability (DUS) characters for Protection of Plant Varieties and Farmers Rights Authority (PPVFRA) registration because of its property to identify the dissimilarity between the newly released and the existing genotypes as well as to distinguish the germplasm. Cereal crops exhibit cross-genera transferability, of DNA markers into many cereals such as maize, Characterization of little millet (Panicum sumatrense) varieties using morphological descriptors and SSR based DNA fingerprinting
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