从线粒体DNA中核苷酸的分布来区分狐科和熊科。

Andrij Rovenchak
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引用次数: 4

摘要

线粒体DNA中核苷酸序列的秩-频率分布以类似于语言学方法的方式定义,频率最高的核碱基作为空白。对于这样的序列,计算熵和平均长度。这些参数被证明可以区分猫科和熊科的物种。从纯粹的数值来看,我们能够特别地看到大熊猫是熊,而考拉不是。用一个简单的概率模型解释了观测到的参数之间的线性关系。采用基于玻色分布的非加性泛化方法分析核苷酸序列的频谱。在这种情况下,家庭的分离并不是很明显。然而,与熊科相比,Felidae的分布平均尾巴更长。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Telling apart Felidae and Ursidae from the distribution of nucleotides in mitochondrial DNA.
Rank--frequency distributions of nucleotide sequences in mitochondrial DNA are defined in a way analogous to the linguistic approach, with the highest-frequent nucleobase serving as a whitespace. For such sequences, entropy and mean length are calculated. These parameters are shown to discriminate the species of the Felidae (cats) and Ursidae (bears) families. From purely numerical values we are able to see in particular that giant pandas are bears while koalas are not. The observed linear relation between the parameters is explained using a simple probabilistic model. The approach based on the nonadditive generalization of the Bose-distribution is used to analyze the frequency spectra of the nucleotide sequences. In this case, the separation of families is not very sharp. Nevertheless, the distributions for Felidae have on average longer tails comparing to Ursidae.
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