酶抑制剂与细胞毒性化学实体的分子对接研究

Sadia Sultan, G. K. S. Singh, K. Ashraf, M. Ashraf
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引用次数: 2

摘要

对接是一种强大的方法,可以对大型化合物库进行虚拟筛选,使用评分函数对构象进行排序,并提出配体如何抑制靶标的结构假设,这在先导物优化中是非常宝贵的。利用实验证实的活性化合物,进行了详细的对接研究,以确定模型酵母α -葡萄糖苷酶和人肠道麦芽糖酶-葡萄糖淀粉酶活性位点的分子相互作用机制及其结合方式。所有活性配体与酵母菌α -葡萄糖苷酶的结合亲和度均高于人肠道和胰腺麦芽糖酶,平均亲和度分别为~ (cid:1) 1.3和~ (cid:1) 0.8 kcal/ mol。合成了30种喹啉衍生物,并对其β -葡萄糖醛酸酶抑制潜能进行了评价。24个β -葡糖苷酸类似物的ic50值为2.11 (cid:3) 0.05 ~ 46.14 (cid:3) 0.95 μ M,高于标准d -糖酸1,4-内酯(ic50 = 48.4 (cid:3) 1.25 μ M)。通过对接研究,建立了活性化合物与酶活性位点的构效关系及相互作用。此外,还合成了小系列的啉腙,形成了啉腙支架。对HepG2(人肝细胞肝癌)和MCF-7(人乳腺腺癌)等人类癌细胞系进行了体外抗癌潜力检测。分子对接研究也进行了了解结合相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular Docking Studies of Enzyme Inhibitors and Cytotoxic Chemical Entities
Docking is a powerful approach to perform virtual screening on large library of compounds, rank the conformations using a scoring function, and propose structural hypotheses of how the ligands inhibit the target, which is invaluable in lead optimization. Using experimentally proven active compounds, detailed docking studies were performed to determine the mech-anism of molecular interaction and its binding mode in the active site of the modeled yeast α -glucosidase and human intestinal maltase-glucoamylase. All active ligands were found to have greater binding affinity with the yeast α -glucosidase as compared to that of human homologs, intestinal, and pancreatic maltase, by an average value of ~ (cid:1) 1.3 and ~ (cid:1) 0.8 kcal/ mol, respectively. Thirty quinoline derivatives have been synthesized and evaluated against β -glucuronidase inhibitory potential. Twenty-four analogs, which showed outstanding β glucuronidase activity, have IC 50 values ranging between 2.11 (cid:3) 0.05 and 46.14 (cid:3) 0.95 μ M than standard D-saccharic acid 1,4-lactone (IC 50 = 48.4 (cid:3) 1.25 μ M). Structure activity relationship and the interaction of the active compounds and enzyme active site with the help of docking studies were established. In addition, Small series of morpholine hydrazones synthesized to form morpholine hydrazones scaffold. The in vitro anti-cancer potential of all these compounds were checked against human cancer cell lines such as HepG2 (Human hepatocellular liver carcinoma) and MCF-7 (Human breast adenocarcinoma). Molecular docking studies were also performed to understand the binding interaction.
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